| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027633
Identifier: 238027633
GI number: 238027633
Start: 2245796
End: 2246131
Strand: Reverse
Name: 238027633
Synonym: bglu_1g20540
Alternate gene names: NA
Gene position: 2246131-2245796 (Counterclockwise)
Preceding gene: 238027634
Following gene: 238027632
Centisome position: 57.5
GC content: 66.07
Gene sequence:
>336_bases GTGACGGCGCGCCTGATTGGATTCCCGAAAGTGCTCACCTTCCGGTCGGAGGATCTGCGGCGCCTGGTGGTGACGCTCCC CTGCATGAACTGCGGCGTCGAGCGGTACACGCAGGCCGCGCACATGAACCTTGGCAAGGGCGGCGCGCTGAAGGCGAGCG ACGCGGCGATCGCAGCCTTGTGCTGCGACCGTCCGGGCATCCGCGGTTGCCACGCGATGCTCGACCAGGGCGGCGTGATG ACGAAATCCGAACGGCGGCTATTCGAGATCGAGATGGTGGCACTGACCTACATCGCGCTGATGGAGCGCGGCCTCCTGGA GGTGGGCAAGCAATGA
Upstream 100 bases:
>100_bases CCTGCGGGCACACGCGGTTCGAAGTCGGGAATGCGGCGCTGCACGAGCGCGGCGAATTTGCTGTTTGCCAACGGTGCGCG GCCGCGCGCGGGGAGGGGAC
Downstream 100 bases:
>100_bases GCGAGCGAGTGTTTCGGGCGTTCTCCCTGCGGACGCCGATGGTCTGGGAAGCGATCGTGGAGGTGGTTCGCGCGCACGCC AAGGCGTACATCGATCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVM TKSERRLFEIEMVALTYIALMERGLLEVGKQ
Sequences:
>Translated_111_residues MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVM TKSERRLFEIEMVALTYIALMERGLLEVGKQ >Mature_110_residues TARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVMT KSERRLFEIEMVALTYIALMERGLLEVGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12158; Mature: 12026
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAAL CCCCCCCCCHHEEECHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH CCDRPGIRGCHAMLDQGGVMTKSERRLFEIEMVALTYIALMERGLLEVGKQ HCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAAL CCCCCCCCHHEEECHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH CCDRPGIRGCHAMLDQGGVMTKSERRLFEIEMVALTYIALMERGLLEVGKQ HCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA