Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027633

Identifier: 238027633

GI number: 238027633

Start: 2245796

End: 2246131

Strand: Reverse

Name: 238027633

Synonym: bglu_1g20540

Alternate gene names: NA

Gene position: 2246131-2245796 (Counterclockwise)

Preceding gene: 238027634

Following gene: 238027632

Centisome position: 57.5

GC content: 66.07

Gene sequence:

>336_bases
GTGACGGCGCGCCTGATTGGATTCCCGAAAGTGCTCACCTTCCGGTCGGAGGATCTGCGGCGCCTGGTGGTGACGCTCCC
CTGCATGAACTGCGGCGTCGAGCGGTACACGCAGGCCGCGCACATGAACCTTGGCAAGGGCGGCGCGCTGAAGGCGAGCG
ACGCGGCGATCGCAGCCTTGTGCTGCGACCGTCCGGGCATCCGCGGTTGCCACGCGATGCTCGACCAGGGCGGCGTGATG
ACGAAATCCGAACGGCGGCTATTCGAGATCGAGATGGTGGCACTGACCTACATCGCGCTGATGGAGCGCGGCCTCCTGGA
GGTGGGCAAGCAATGA

Upstream 100 bases:

>100_bases
CCTGCGGGCACACGCGGTTCGAAGTCGGGAATGCGGCGCTGCACGAGCGCGGCGAATTTGCTGTTTGCCAACGGTGCGCG
GCCGCGCGCGGGGAGGGGAC

Downstream 100 bases:

>100_bases
GCGAGCGAGTGTTTCGGGCGTTCTCCCTGCGGACGCCGATGGTCTGGGAAGCGATCGTGGAGGTGGTTCGCGCGCACGCC
AAGGCGTACATCGATCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVM
TKSERRLFEIEMVALTYIALMERGLLEVGKQ

Sequences:

>Translated_111_residues
MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVM
TKSERRLFEIEMVALTYIALMERGLLEVGKQ
>Mature_110_residues
TARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAALCCDRPGIRGCHAMLDQGGVMT
KSERRLFEIEMVALTYIALMERGLLEVGKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12158; Mature: 12026

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAAL
CCCCCCCCCHHEEECHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CCDRPGIRGCHAMLDQGGVMTKSERRLFEIEMVALTYIALMERGLLEVGKQ
HCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TARLIGFPKVLTFRSEDLRRLVVTLPCMNCGVERYTQAAHMNLGKGGALKASDAAIAAL
CCCCCCCCHHEEECHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CCDRPGIRGCHAMLDQGGVMTKSERRLFEIEMVALTYIALMERGLLEVGKQ
HCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA