| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027606
Identifier: 238027606
GI number: 238027606
Start: 2216705
End: 2217112
Strand: Reverse
Name: 238027606
Synonym: bglu_1g20270
Alternate gene names: NA
Gene position: 2217112-2216705 (Counterclockwise)
Preceding gene: 238027607
Following gene: 238027605
Centisome position: 56.75
GC content: 61.76
Gene sequence:
>408_bases ATGCCTGAACAAAGATCGACCAACGCTGGCGTCGAGGAGCGACTGCGCAGCGGAGACCGCCGCTTCTCGAAGTTGGAAGC ACGAATGAACCAGATGGAGGCGCAGGTCAGGAGTCACCTCGAGCGCCAGGACGCACACCTTCGGCAGCAGGACGAACACC TCCGGATACAAGACGGAAAGCTCGACACCGTCGTGGCCAATACGCAGTCCATGGTCGAGACGTGGCAGGGCGGTCAGAAG GTGATGCGTGCGCTCTGCCGGATTGCCGATGCATGGCGATTTCTGATGCGCAACGTGGTCGGGCAACTGGCCGCGTTCAC GCTGGTCGCCATCGTCATTTATCGCTACCTGCATCACGAGCCGGTGCCCGACTGGGCGCATGCGGCCTTCACGTTCCTCT TGGGGTGA
Upstream 100 bases:
>100_bases CTCCGGCACCTCGTTCGCTTTGAGCGGCACCGGAACCGACGTCGTGCAGTTCGTTTGCACTGGAACCTGAGCGCGCTGCA CTTCCTTTCCCGGGGATCAA
Downstream 100 bases:
>100_bases CCATGACACCGAATGACTTCATCAACGCGATCTCGCCGGCGGCGTGCCAACTGGCGACGTCCACCAAGATCCCGGCGAGC TTCGTTGTTGCGCAGGCCGC
Product: putative phage transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPEQRSTNAGVEERLRSGDRRFSKLEARMNQMEAQVRSHLERQDAHLRQQDEHLRIQDGKLDTVVANTQSMVETWQGGQK VMRALCRIADAWRFLMRNVVGQLAAFTLVAIVIYRYLHHEPVPDWAHAAFTFLLG
Sequences:
>Translated_135_residues MPEQRSTNAGVEERLRSGDRRFSKLEARMNQMEAQVRSHLERQDAHLRQQDEHLRIQDGKLDTVVANTQSMVETWQGGQK VMRALCRIADAWRFLMRNVVGQLAAFTLVAIVIYRYLHHEPVPDWAHAAFTFLLG >Mature_134_residues PEQRSTNAGVEERLRSGDRRFSKLEARMNQMEAQVRSHLERQDAHLRQQDEHLRIQDGKLDTVVANTQSMVETWQGGQKV MRALCRIADAWRFLMRNVVGQLAAFTLVAIVIYRYLHHEPVPDWAHAAFTFLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15655; Mature: 15524
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQRSTNAGVEERLRSGDRRFSKLEARMNQMEAQVRSHLERQDAHLRQQDEHLRIQDGK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDTVVANTQSMVETWQGGQKVMRALCRIADAWRFLMRNVVGQLAAFTLVAIVIYRYLHHE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVPDWAHAAFTFLLG CCCHHHHHHHHHHCC >Mature Secondary Structure PEQRSTNAGVEERLRSGDRRFSKLEARMNQMEAQVRSHLERQDAHLRQQDEHLRIQDGK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDTVVANTQSMVETWQGGQKVMRALCRIADAWRFLMRNVVGQLAAFTLVAIVIYRYLHHE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PVPDWAHAAFTFLLG CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA