Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027607

Identifier: 238027607

GI number: 238027607

Start: 2217143

End: 2219113

Strand: Reverse

Name: 238027607

Synonym: bglu_1g20280

Alternate gene names: NA

Gene position: 2219113-2217143 (Counterclockwise)

Preceding gene: 238027608

Following gene: 238027606

Centisome position: 56.81

GC content: 64.13

Gene sequence:

>1971_bases
ATGAATCGCATTTTCAAAACGCTGCTGCTCGCGGTCTCGCTGGTAGCCGTCTGTGCGCCCCATCTCGCGATGGGGCAGTT
TGTTCCTGGCCAGGTGCTGACCGCGGAGCAGTTGAACACGGCATTCAGCCGCGTTGCCGCAAACGCATTGCCGGTGGCGG
GTGGAACCCTCACGGGGCCGCTCAACGGCACCACGGCGTCGTTTGCGACGGGCAACTTCTCGACCGGCAATTTCGCGACG
TTGACCAGTACGGGGAGCGTTTCGTTCTCGACGCCTCTTTCGTTTGCCTCGGGCGGCACCGGCGCGACCACGGCGCTGGG
CGCGACCGGCAATCTGCAGTTCCAGGCATCGCTGTCCGGCGCCGGCGGCCGCTCGGTCGCAAGCAAGCTGAGCGACGTGG
TGAGCATCCTCGACTTCCCGGGCTGCGACAAAACCGGTGTAGCCGATAGCACGGCCTGCATCCAGGCCGCGCTGAACTCG
GGAGCGAAGACCGTCTATATCCCGGCGGGCCAGTATCGCGAGAGCGGCCTGGTCTTGCCGCAGACCGTCGGATTCACGCT
CTACGGAGACGGCCCGAACAGTGTCCTGATCCAGACGGGCGGCTCGATCAGCTATCCGGCGATCGCGGGCGCCTTCACGT
TCGACTCGCACTCGACGATCCGTGATCTGAAGTTCGACGGCACCGCCGGCACCGCGAACACGCTCGACACCACGTTCGCG
CAGACGCTCGACCTGCTGAACCTGGCCTTCAACAATGTCCCGGCCGGCTATTCGTCGATCAAGATCGACGGCAACCCGAC
GACGTCGGTCTACATGCACGACGTGCGGCTGAAGAACATCCGCATCTACTCGACGACTGCCGGCAAGGCCGGGATCGAGT
TGGGGGCGTTCGCATCCGACTCGACGATCGACGGCTTCATCATGAACGGCGGGTTCGTCGTGAACTACTGCATCTACGCC
AACCCCGGCGCGCAGACCACGATGATCCAGAACTCGCATCCCTACAACGCGTCGATCAACGTCGTGCGCCTGGCAGGGAA
CAACAACGACTTCGGGTTCTTTGGCAACACGATCGACAACGCGCTCGGCGACGTCTTGTACATCAAGAACTCCGCATACA
CGCGTATCGCATCGACGTGGATCGAGTCGATCAACAGCCTTCAGCGCGGCCTCGTGCTGGATGGCTCGTCGAACAATACC
GCCATGGGGCTCGGCTGCCAGACATACGGGGTGACGAACGCAACATCGTGCGTCGCCGAGATCAACGGCGCTGCCGGAAA
CCAGATCTTCGGCGCGCAGCTCGACAGCGCATCGAACTACTCCGCGCCGTTCAATCTCACCGGATCGGGAAGCTTCTACC
AGTCCGTGAACAGCGGCAACTCGTTGAGCTCGATGAGTGCTGCGGCCGGCTCGTCGCCAGCGCTGGCCGCCATCGGCTCG
GACGCCACGATTCCCGTGACGCTCAGTCCCAAGGGCGGCGGCGCGGTGCAGATGAAGCTGAGCAACTCGGCCACGGCGAG
CTTCTATTCCGACACCGCATCCGAGCTCGCGGTCGAGGCATACAACACGGCGTCAGCCGGGACGAAGTTCAACATCAATC
TCACCAAATACGGCGGCCGCCTGCTCGTCGGCGGCACGGACGACGGCACTAACAAGCTGCAGGTTGGAGGCTCGGCCGCC
GTCTACGGGAACCTGGCCGCGACCGGCACCGGCGCGATGCCGTTGTATTCGACCTCCGGCGCGGCCGCCAACGCGCCGCA
CATGGTGAAGGGGACGGCGACACTCGCCTCGGGCGCGGCCACGGTCACGCTCTCGGGCGCAGCTGCCTATACCTCGTCGA
CCAGCTATGCATGCACGGCCACCGACACGACCGCTACCAACGCGGTGCGCATCTCACAAACCTCCGGCACCTCGTTCGCT
TTGAGCGGCACCGGAACCGACGTCGTGCAGTTCGTTTGCACTGGAACCTGA

Upstream 100 bases:

>100_bases
CGCTGACTGGCACCCGAACGACGGGCAGCGCTGGTATGTCGTGAACGGCAGCTTGACCAATGTGGCGCCGACGTCGTCGA
ACTGACCGGGGAAGAGGACC

Downstream 100 bases:

>100_bases
GCGCGCTGCACTTCCTTTCCCGGGGATCAAATGCCTGAACAAAGATCGACCAACGCTGGCGTCGAGGAGCGACTGCGCAG
CGGAGACCGCCGCTTCTCGA

Product: outer membrane autotransporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MNRIFKTLLLAVSLVAVCAPHLAMGQFVPGQVLTAEQLNTAFSRVAANALPVAGGTLTGPLNGTTASFATGNFSTGNFAT
LTSTGSVSFSTPLSFASGGTGATTALGATGNLQFQASLSGAGGRSVASKLSDVVSILDFPGCDKTGVADSTACIQAALNS
GAKTVYIPAGQYRESGLVLPQTVGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFA
QTLDLLNLAFNNVPAGYSSIKIDGNPTTSVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYA
NPGAQTTMIQNSHPYNASINVVRLAGNNNDFGFFGNTIDNALGDVLYIKNSAYTRIASTWIESINSLQRGLVLDGSSNNT
AMGLGCQTYGVTNATSCVAEINGAAGNQIFGAQLDSASNYSAPFNLTGSGSFYQSVNSGNSLSSMSAAAGSSPALAAIGS
DATIPVTLSPKGGGAVQMKLSNSATASFYSDTASELAVEAYNTASAGTKFNINLTKYGGRLLVGGTDDGTNKLQVGGSAA
VYGNLAATGTGAMPLYSTSGAAANAPHMVKGTATLASGAATVTLSGAAAYTSSTSYACTATDTTATNAVRISQTSGTSFA
LSGTGTDVVQFVCTGT

Sequences:

>Translated_656_residues
MNRIFKTLLLAVSLVAVCAPHLAMGQFVPGQVLTAEQLNTAFSRVAANALPVAGGTLTGPLNGTTASFATGNFSTGNFAT
LTSTGSVSFSTPLSFASGGTGATTALGATGNLQFQASLSGAGGRSVASKLSDVVSILDFPGCDKTGVADSTACIQAALNS
GAKTVYIPAGQYRESGLVLPQTVGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFA
QTLDLLNLAFNNVPAGYSSIKIDGNPTTSVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYA
NPGAQTTMIQNSHPYNASINVVRLAGNNNDFGFFGNTIDNALGDVLYIKNSAYTRIASTWIESINSLQRGLVLDGSSNNT
AMGLGCQTYGVTNATSCVAEINGAAGNQIFGAQLDSASNYSAPFNLTGSGSFYQSVNSGNSLSSMSAAAGSSPALAAIGS
DATIPVTLSPKGGGAVQMKLSNSATASFYSDTASELAVEAYNTASAGTKFNINLTKYGGRLLVGGTDDGTNKLQVGGSAA
VYGNLAATGTGAMPLYSTSGAAANAPHMVKGTATLASGAATVTLSGAAAYTSSTSYACTATDTTATNAVRISQTSGTSFA
LSGTGTDVVQFVCTGT
>Mature_656_residues
MNRIFKTLLLAVSLVAVCAPHLAMGQFVPGQVLTAEQLNTAFSRVAANALPVAGGTLTGPLNGTTASFATGNFSTGNFAT
LTSTGSVSFSTPLSFASGGTGATTALGATGNLQFQASLSGAGGRSVASKLSDVVSILDFPGCDKTGVADSTACIQAALNS
GAKTVYIPAGQYRESGLVLPQTVGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFA
QTLDLLNLAFNNVPAGYSSIKIDGNPTTSVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYA
NPGAQTTMIQNSHPYNASINVVRLAGNNNDFGFFGNTIDNALGDVLYIKNSAYTRIASTWIESINSLQRGLVLDGSSNNT
AMGLGCQTYGVTNATSCVAEINGAAGNQIFGAQLDSASNYSAPFNLTGSGSFYQSVNSGNSLSSMSAAAGSSPALAAIGS
DATIPVTLSPKGGGAVQMKLSNSATASFYSDTASELAVEAYNTASAGTKFNINLTKYGGRLLVGGTDDGTNKLQVGGSAA
VYGNLAATGTGAMPLYSTSGAAANAPHMVKGTATLASGAATVTLSGAAAYTSSTSYACTATDTTATNAVRISQTSGTSFA
LSGTGTDVVQFVCTGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66104; Mature: 66104

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS00800 PECTINESTERASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIFKTLLLAVSLVAVCAPHLAMGQFVPGQVLTAEQLNTAFSRVAANALPVAGGTLTGP
CHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEECC
LNGTTASFATGNFSTGNFATLTSTGSVSFSTPLSFASGGTGATTALGATGNLQFQASLSG
CCCCEEEEECCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC
AGGRSVASKLSDVVSILDFPGCDKTGVADSTACIQAALNSGAKTVYIPAGQYRESGLVLP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE
QTVGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFA
EECCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHH
QTLDLLNLAFNNVPAGYSSIKIDGNPTTSVYMHDVRLKNIRIYSTTAGKAGIELGAFASD
HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEECCCCC
STIDGFIMNGGFVVNYCIYANPGAQTTMIQNSHPYNASINVVRLAGNNNDFGFFGNTIDN
CCCCEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCEECCHHHH
ALGDVLYIKNSAYTRIASTWIESINSLQRGLVLDGSSNNTAMGLGCQTYGVTNATSCVAE
HHCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECEEECCCCCHHHHHHC
INGAAGNQIFGAQLDSASNYSAPFNLTGSGSFYQSVNSGNSLSSMSAAAGSSPALAAIGS
CCCCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHCCCCCCCEEEECC
DATIPVTLSPKGGGAVQMKLSNSATASFYSDTASELAVEAYNTASAGTKFNINLTKYGGR
CCEEEEEECCCCCCEEEEEECCCCCEEEHHCCHHHHEEEEECCCCCCCEEEEEEEECCCE
LLVGGTDDGTNKLQVGGSAAVYGNLAATGTGAMPLYSTSGAAANAPHMVKGTATLASGAA
EEEECCCCCCCEEEECCCEEEEECEEECCCCCCCEEECCCCCCCCCEEEECCEEECCCCE
TVTLSGAAAYTSSTSYACTATDTTATNAVRISQTSGTSFALSGTGTDVVQFVCTGT
EEEEECCEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MNRIFKTLLLAVSLVAVCAPHLAMGQFVPGQVLTAEQLNTAFSRVAANALPVAGGTLTGP
CHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCEEECC
LNGTTASFATGNFSTGNFATLTSTGSVSFSTPLSFASGGTGATTALGATGNLQFQASLSG
CCCCEEEEECCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC
AGGRSVASKLSDVVSILDFPGCDKTGVADSTACIQAALNSGAKTVYIPAGQYRESGLVLP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE
QTVGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFA
EECCEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHH
QTLDLLNLAFNNVPAGYSSIKIDGNPTTSVYMHDVRLKNIRIYSTTAGKAGIELGAFASD
HHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEEEEEEEEECCCCCCCEEECCCCC
STIDGFIMNGGFVVNYCIYANPGAQTTMIQNSHPYNASINVVRLAGNNNDFGFFGNTIDN
CCCCEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCEECCHHHH
ALGDVLYIKNSAYTRIASTWIESINSLQRGLVLDGSSNNTAMGLGCQTYGVTNATSCVAE
HHCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECEEECCCCCHHHHHHC
INGAAGNQIFGAQLDSASNYSAPFNLTGSGSFYQSVNSGNSLSSMSAAAGSSPALAAIGS
CCCCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHCCCCCCCEEEECC
DATIPVTLSPKGGGAVQMKLSNSATASFYSDTASELAVEAYNTASAGTKFNINLTKYGGR
CCEEEEEECCCCCCEEEEEECCCCCEEEHHCCHHHHEEEEECCCCCCCEEEEEEEECCCE
LLVGGTDDGTNKLQVGGSAAVYGNLAATGTGAMPLYSTSGAAANAPHMVKGTATLASGAA
EEEECCCCCCCEEEECCCEEEEECEEECCCCCCCEEECCCCCCCCCEEEECCEEECCCCE
TVTLSGAAAYTSSTSYACTATDTTATNAVRISQTSGTSFALSGTGTDVVQFVCTGT
EEEEECCEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA