Click here to switch to the map view.

The map label for this gene is ylbK [H]

Identifier: 238027603

GI number: 238027603

Start: 2214509

End: 2215312

Strand: Reverse

Name: ylbK [H]

Synonym: bglu_1g20240

Alternate gene names: 238027603

Gene position: 2215312-2214509 (Counterclockwise)

Preceding gene: 238027604

Following gene: 238027602

Centisome position: 56.71

GC content: 68.41

Gene sequence:

>804_bases
ATGAAGCAGATCCGAGTTGCCTTGAGCGGCTCGGGCTTCCGCCTGTCGGCGCACCTCGGTGCGCTGCAGGCGGTTGCCGA
TGCCGGGTATGAGGTCGTCGAGCTCGCCGGCACGTCGGGCGGCTCGATCGTCGCTGCGCTCTACGCCAGCGGCATGTCGC
TGGCCGACATGCACACACTCTGCATGTCGGTCGACTGGTCACCGATGATGCGGTTCTCGGCCTGGTCTGTAATCCGGGTC
AACGCGCTCTGCAGCGGCGACGAGATGCTGGCGTTCCTCATGCAGCAGACGGGAGGGCGGACGTTCGACCAGATCGACGT
CGGATTGAAGATCGTTGCGGCCGATCTTCTGACGGAGCGCGAATTCCAGCTGTCGCGCGCCACGACGCCGGCAGTGCCGA
TCGCGCTCGCGGCCCGGGCGAGCGCGTCGATTCCGTTCGTCTTTCCGCCCGTGGCCGCCGCTGGCGCGCTGCTCGTCGAC
GGCGGCACGGCCGACAACATCCCCGTGAGCGATCTGACCGTGGATGAGGTGCCGCGTCTGGGCGTGTTCCTGAGGTCCGA
TGACGCCCCGCTCGCGCCAGGCCGTTACGGGCTGCGCACGATCGCGTCGCGGGTGATCGACCTCATGCTGGCGTCCAACG
AGGCGGCCAGGATGGCGGCGGACGAGCAGAGCGGGGCGATGATCGTCAGCGTGCCGACCGGCTACGCGAGCTCGTTCGAC
CGAGATATGGCGCCCGCCGTCCGGCAGCGGCTCTTCGACGACGGGTACAGGGAAACCAGCAGGAGCCTCGCGGCGATGCC
GTGA

Upstream 100 bases:

>100_bases
CCCTGTCGGTCTACGGCCAGGCGTCGGCGACGACTGCGGCCGCTACGGCGCCCCCCGCGTCGGCCAGCGAAGCAGTGCCG
GCTAGCTCGGCGGCCGCGCA

Downstream 100 bases:

>100_bases
GGGAGTTGTAAGACAGGGCGACCGGCATCGGTGTTGCAGCACCGATGTGGCCACCCATCACTGAACGCGCCAGTGACAGG
CCAAGGCCCTGCCACCCCCG

Product: putative exported phospholipase, patatin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKQIRVALSGSGFRLSAHLGALQAVADAGYEVVELAGTSGGSIVAALYASGMSLADMHTLCMSVDWSPMMRFSAWSVIRV
NALCSGDEMLAFLMQQTGGRTFDQIDVGLKIVAADLLTEREFQLSRATTPAVPIALAARASASIPFVFPPVAAAGALLVD
GGTADNIPVSDLTVDEVPRLGVFLRSDDAPLAPGRYGLRTIASRVIDLMLASNEAARMAADEQSGAMIVSVPTGYASSFD
RDMAPAVRQRLFDDGYRETSRSLAAMP

Sequences:

>Translated_267_residues
MKQIRVALSGSGFRLSAHLGALQAVADAGYEVVELAGTSGGSIVAALYASGMSLADMHTLCMSVDWSPMMRFSAWSVIRV
NALCSGDEMLAFLMQQTGGRTFDQIDVGLKIVAADLLTEREFQLSRATTPAVPIALAARASASIPFVFPPVAAAGALLVD
GGTADNIPVSDLTVDEVPRLGVFLRSDDAPLAPGRYGLRTIASRVIDLMLASNEAARMAADEQSGAMIVSVPTGYASSFD
RDMAPAVRQRLFDDGYRETSRSLAAMP
>Mature_267_residues
MKQIRVALSGSGFRLSAHLGALQAVADAGYEVVELAGTSGGSIVAALYASGMSLADMHTLCMSVDWSPMMRFSAWSVIRV
NALCSGDEMLAFLMQQTGGRTFDQIDVGLKIVAADLLTEREFQLSRATTPAVPIALAARASASIPFVFPPVAAAGALLVD
GGTADNIPVSDLTVDEVPRLGVFLRSDDAPLAPGRYGLRTIASRVIDLMLASNEAARMAADEQSGAMIVSVPTGYASSFD
RDMAPAVRQRLFDDGYRETSRSLAAMP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI226510936, Length=179, Percent_Identity=31.2849162011173, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 28122; Mature: 28122

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIRVALSGSGFRLSAHLGALQAVADAGYEVVELAGTSGGSIVAALYASGMSLADMHTL
CCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
CMSVDWSPMMRFSAWSVIRVNALCSGDEMLAFLMQQTGGRTFDQIDVGLKIVAADLLTER
HHCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EFQLSRATTPAVPIALAARASASIPFVFPPVAAAGALLVDGGTADNIPVSDLTVDEVPRL
HHHHHHCCCCCCHHEEEHHCCCCCCEEECCHHHCCEEEECCCCCCCCCCCCCCHHHCCCC
GVFLRSDDAPLAPGRYGLRTIASRVIDLMLASNEAARMAADEQSGAMIVSVPTGYASSFD
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHCC
RDMAPAVRQRLFDDGYRETSRSLAAMP
CHHHHHHHHHHHHCHHHHHHHHHCCCC
>Mature Secondary Structure
MKQIRVALSGSGFRLSAHLGALQAVADAGYEVVELAGTSGGSIVAALYASGMSLADMHTL
CCEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
CMSVDWSPMMRFSAWSVIRVNALCSGDEMLAFLMQQTGGRTFDQIDVGLKIVAADLLTER
HHCCCCHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EFQLSRATTPAVPIALAARASASIPFVFPPVAAAGALLVDGGTADNIPVSDLTVDEVPRL
HHHHHHCCCCCCHHEEEHHCCCCCCEEECCHHHCCEEEECCCCCCCCCCCCCCHHHCCCC
GVFLRSDDAPLAPGRYGLRTIASRVIDLMLASNEAARMAADEQSGAMIVSVPTGYASSFD
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHCC
RDMAPAVRQRLFDDGYRETSRSLAAMP
CHHHHHHHHHHHHCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]