Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_012724 |
Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027604
Identifier: 238027604
GI number: 238027604
Start: 2215309
End: 2215788
Strand: Reverse
Name: 238027604
Synonym: bglu_1g20250
Alternate gene names: NA
Gene position: 2215788-2215309 (Counterclockwise)
Preceding gene: 238027605
Following gene: 238027603
Centisome position: 56.72
GC content: 71.04
Gene sequence:
>480_bases ATGAAGAAGCTCATGCTGCTCGCGGCAGGCGCAGTGCTGGCCGTCGCATCCCTGGCCGGTTGCTCGACCGCCTCCCAGCA ATCCGTTGCCGGCGCGCTGGCGACGCTCCAGACCGCTGTGAAGAACGGCTGCACGGTGGTGCAGCCGACGCTCGTGGCAG TGGCCGCGATCGACCCGGCCGTCTCGGCCGCGGCGGCCGCGAACGGGCTGTTCTGCACGGCCGCAACGTCGATTACGGTG ACCTCCGCCCAGGCCCTGATCGGCACCGGCATCCCGGCGATCGAGACGGCCGTGCTCGCGTCGAAGCTGATCCCGGACAA CCAGAAGCCGATCGCGATCGCGGCACTCGGGGTGCTGCAACTGTCGGTTACGCAGGCCCTGTCGGTCTACGGCCAGGCGT CGGCGACGACTGCGGCCGCTACGGCGCCCCCCGCGTCGGCCAGCGAAGCAGTGCCGGCTAGCTCGGCGGCCGCGCAATGA
Upstream 100 bases:
>100_bases CGGCCGCCGGTGCCCACCCTGCAGTAACGCCTCATCTGACGTCCACGCACCCACGCTTTTCCCACCCGCCGCGCTCGCGG CATTCCCGAAGGTACTAACC
Downstream 100 bases:
>100_bases AGCAGATCCGAGTTGCCTTGAGCGGCTCGGGCTTCCGCCTGTCGGCGCACCTCGGTGCGCTGCAGGCGGTTGCCGATGCC GGGTATGAGGTCGTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKKLMLLAAGAVLAVASLAGCSTASQQSVAGALATLQTAVKNGCTVVQPTLVAVAAIDPAVSAAAAANGLFCTAATSITV TSAQALIGTGIPAIETAVLASKLIPDNQKPIAIAALGVLQLSVTQALSVYGQASATTAAATAPPASASEAVPASSAAAQ
Sequences:
>Translated_159_residues MKKLMLLAAGAVLAVASLAGCSTASQQSVAGALATLQTAVKNGCTVVQPTLVAVAAIDPAVSAAAAANGLFCTAATSITV TSAQALIGTGIPAIETAVLASKLIPDNQKPIAIAALGVLQLSVTQALSVYGQASATTAAATAPPASASEAVPASSAAAQ >Mature_159_residues MKKLMLLAAGAVLAVASLAGCSTASQQSVAGALATLQTAVKNGCTVVQPTLVAVAAIDPAVSAAAAANGLFCTAATSITV TSAQALIGTGIPAIETAVLASKLIPDNQKPIAIAALGVLQLSVTQALSVYGQASATTAAATAPPASASEAVPASSAAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15097; Mature: 15097
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMLLAAGAVLAVASLAGCSTASQQSVAGALATLQTAVKNGCTVVQPTLVAVAAIDPA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCHH VSAAAAANGLFCTAATSITVTSAQALIGTGIPAIETAVLASKLIPDNQKPIAIAALGVLQ HHHHHHCCCEEEEEECEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHH LSVTQALSVYGQASATTAAATAPPASASEAVPASSAAAQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLMLLAAGAVLAVASLAGCSTASQQSVAGALATLQTAVKNGCTVVQPTLVAVAAIDPA CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHCHH VSAAAAANGLFCTAATSITVTSAQALIGTGIPAIETAVLASKLIPDNQKPIAIAALGVLQ HHHHHHCCCEEEEEECEEEEHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHH LSVTQALSVYGQASATTAAATAPPASASEAVPASSAAAQ HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA