Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is dam [C]

Identifier: 238027602

GI number: 238027602

Start: 2213575

End: 2214366

Strand: Reverse

Name: dam [C]

Synonym: bglu_1g20230

Alternate gene names: 238027602

Gene position: 2214366-2213575 (Counterclockwise)

Preceding gene: 238027603

Following gene: 238027600

Centisome position: 56.68

GC content: 63.13

Gene sequence:

>792_bases
ATGGCTTTACCTATCATTCCCTGGATCGGCGGAAAGCGCCGTCTCGCGGATCAGCTCATACCGCGGTTTCCGCGTCACGA
GTGCTATGTAGAGGTGTTTGCTGGCGGGGCCGCGTTGTACTTCATGCGGCCGCCCGCGAACGTTGAGATCATCAACGACG
TCAACGGCGAGTTGGTGAACCTGTACCGGGTGGTCAAGGTCCACCCCGAGGAGTTCGTCCGGCAGTTCAGGTGGGCGCTG
AGCAGTCGGGCGATGTTCGAGTGGCAGCAGAAGACGCCACCCGAGACGCTGACGGATATCCAGCGAGCGGCCAGGTTCTT
CTACTTGCAGCAGCTGTGCTTCGGCGGCAAGGTGGAAGGGCAGACGTTCGGCACGTCCACAACGTCGCCGCCTGGGCTTA
ACCTGTGGCGGATTGAGGAGACGCTGTCGTCTGCCCATCTCCGGCTGGCGGCGACCTGCATCGAGCAACTGGACTGGCGG
GATTGCGTCGATCGGTACGATCGCGGCCACACGTTTTTCTACATGGACCCTCCGTATCTCGAGATGACGGGGTATGGCGT
CCCGTTTCCCGTGAGCGAGTACGGGGCGGTCGCAGACCGCATGCGCGCCTTGAAGGGGAAGGCCATTCTCAGCGTGAACG
ACCATCCCGAGACCCGCCGGATCTTCGACGGCTTCCATGTCGAGACGGTCGACATCGAGTACACGGTGAGCGGGGGCGGC
CGCTCGGTGCCTCGGCGGGAGTTGATCGTCTTCAGCTGGGATGTGTCGGCGGAGCCGGCGGGGCTGTTCTAG

Upstream 100 bases:

>100_bases
CGATGTGGCCACCCATCACTGAACGCGCCAGTGACAGGCCAAGGCCCTGCCACCCCCGGGGGGCGGGCCGATTGTAGCAA
TAATCGGAGGTTTGTCACGG

Downstream 100 bases:

>100_bases
ACCAAGGTGCCCGCCCGGCAGTGCGGGCATCACCAGTCGGCGGCCCTTGTCTCTTCCTGTAGAAGCAGTCTCAGTTGATA
CATTGCGACGAGATGGCCGC

Product: DNA adenine methylase

Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]

Alternate protein names: DNA Adenine Methylase; Adenine-Specific DNA Methyltransferase; Methyltransferase; Site-Specific DNA-Methyltransferase; Site-Specific DNA Methylase; N6 Adenine-Specific DNA Methyltransferase; Methylase; DNA Adenine Methylase Subfamily; Methylase LlaDCHIA; DNA Adenine Methyltransferase; Site-Specific DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Phage DNA Adenine Methylase; Type II DNA Methyltransferase; Prophage; Adenine Specific DNA Methyltransferase; Phage Associated Type II DNA-Methyltransferase; Ype IIs Methyltransferase M.AlwI; Prophage DNA Adenine Methylase; DNA Adenine Methylase Prophage; Adenine-Specific DNA Methyltransferase; Site-Specific DNA-Methyltransferase Bacteriophage Origin; Phage Methylase; DNA Methyltransferase; Phage_related Methylase; Prophage DNA Methylase; LOW QUALITY PROTEIN DNA Adenine Methylase; Dam Methylase; N6 Adenine-Specific DNA-Methyltransferase; Phage-Related Methylase; Adenine-Specific Methyltransferase; DNA Methylase; Type IIs Methyltransferase; Phage DNA Methyltransferase; Site-Specific DNA Methylase Protein

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MALPIIPWIGGKRRLADQLIPRFPRHECYVEVFAGGAALYFMRPPANVEIINDVNGELVNLYRVVKVHPEEFVRQFRWAL
SSRAMFEWQQKTPPETLTDIQRAARFFYLQQLCFGGKVEGQTFGTSTTSPPGLNLWRIEETLSSAHLRLAATCIEQLDWR
DCVDRYDRGHTFFYMDPPYLEMTGYGVPFPVSEYGAVADRMRALKGKAILSVNDHPETRRIFDGFHVETVDIEYTVSGGG
RSVPRRELIVFSWDVSAEPAGLF

Sequences:

>Translated_263_residues
MALPIIPWIGGKRRLADQLIPRFPRHECYVEVFAGGAALYFMRPPANVEIINDVNGELVNLYRVVKVHPEEFVRQFRWAL
SSRAMFEWQQKTPPETLTDIQRAARFFYLQQLCFGGKVEGQTFGTSTTSPPGLNLWRIEETLSSAHLRLAATCIEQLDWR
DCVDRYDRGHTFFYMDPPYLEMTGYGVPFPVSEYGAVADRMRALKGKAILSVNDHPETRRIFDGFHVETVDIEYTVSGGG
RSVPRRELIVFSWDVSAEPAGLF
>Mature_262_residues
ALPIIPWIGGKRRLADQLIPRFPRHECYVEVFAGGAALYFMRPPANVEIINDVNGELVNLYRVVKVHPEEFVRQFRWALS
SRAMFEWQQKTPPETLTDIQRAARFFYLQQLCFGGKVEGQTFGTSTTSPPGLNLWRIEETLSSAHLRLAATCIEQLDWRD
CVDRYDRGHTFFYMDPPYLEMTGYGVPFPVSEYGAVADRMRALKGKAILSVNDHPETRRIFDGFHVETVDIEYTVSGGGR
SVPRRELIVFSWDVSAEPAGLF

Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica

COG id: COG0338

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 30070; Mature: 29938

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPIIPWIGGKRRLADQLIPRFPRHECYVEVFAGGAALYFMRPPANVEIINDVNGELVN
CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCHHEE
LYRVVKVHPEEFVRQFRWALSSRAMFEWQQKTPPETLTDIQRAARFFYLQQLCFGGKVEG
HHHHEEECHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
QTFGTSTTSPPGLNLWRIEETLSSAHLRLAATCIEQLDWRDCVDRYDRGHTFFYMDPPYL
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCEE
EMTGYGVPFPVSEYGAVADRMRALKGKAILSVNDHPETRRIFDGFHVETVDIEYTVSGGG
EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCEEEEEEEEEEECCCC
RSVPRRELIVFSWDVSAEPAGLF
CCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
ALPIIPWIGGKRRLADQLIPRFPRHECYVEVFAGGAALYFMRPPANVEIINDVNGELVN
CCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEECCCCHHEE
LYRVVKVHPEEFVRQFRWALSSRAMFEWQQKTPPETLTDIQRAARFFYLQQLCFGGKVEG
HHHHEEECHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
QTFGTSTTSPPGLNLWRIEETLSSAHLRLAATCIEQLDWRDCVDRYDRGHTFFYMDPPYL
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCEE
EMTGYGVPFPVSEYGAVADRMRALKGKAILSVNDHPETRRIFDGFHVETVDIEYTVSGGG
EEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCEEEEEEEEEEECCCC
RSVPRRELIVFSWDVSAEPAGLF
CCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]

Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]

General reaction: Methyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA