Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is ygiN [C]
Identifier: 238027597
GI number: 238027597
Start: 2206703
End: 2206993
Strand: Reverse
Name: ygiN [C]
Synonym: bglu_1g20150
Alternate gene names: 238027597
Gene position: 2206993-2206703 (Counterclockwise)
Preceding gene: 238027598
Following gene: 238027593
Centisome position: 56.5
GC content: 64.26
Gene sequence:
>291_bases ATGTCAGAAGTCGCCGTGGTTGCCACGATCATTGCCAAGCCGGGCATGGAGGACGCGCTGTTCGAGCAGCTCGGTACCAT CATCGGACCGACCCGCGTCGAGCAAGGAGCGCTGCAATACGACCTGCACCGCGATCGTGACGATCCGCGGCGCTTCGTGT TCTTCGAGCGTTGGGAAAGCGACGCGGCGCTGGCTGCCCACCGGCAGGCGGCCCACATGCTTGCCTATCGGCAGAATGCG GCCGGGTTGATCGAAAGCGTGGAAGTGCGCGTGATGCAACGGGTCGCGTGA
Upstream 100 bases:
>100_bases AGGAAGCGCGGGCAATTTTTTTGTGGACCGCCGACCTCGCGGCCGGCTCGTCCGGATTCGTGTACGCTGCGCGTTCCCGA ATCAGGCCAGGAGCCGAACG
Downstream 100 bases:
>100_bases GCGCGGCGGCGGCCGGTGCCCGGTGCGCGCAGCGTCCGGGCCGCCCCGCTGGGAGGTCAGTGCGCGGCGTTCGGCACGTC GAGGATCAGGATGATCGTCC
Product: antibiotic biosynthesis monooxygenase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSEVAVVATIIAKPGMEDALFEQLGTIIGPTRVEQGALQYDLHRDRDDPRRFVFFERWESDAALAAHRQAAHMLAYRQNA AGLIESVEVRVMQRVA
Sequences:
>Translated_96_residues MSEVAVVATIIAKPGMEDALFEQLGTIIGPTRVEQGALQYDLHRDRDDPRRFVFFERWESDAALAAHRQAAHMLAYRQNA AGLIESVEVRVMQRVA >Mature_95_residues SEVAVVATIIAKPGMEDALFEQLGTIIGPTRVEQGALQYDLHRDRDDPRRFVFFERWESDAALAAHRQAAHMLAYRQNAA GLIESVEVRVMQRVA
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10809; Mature: 10678
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVAVVATIIAKPGMEDALFEQLGTIIGPTRVEQGALQYDLHRDRDDPRRFVFFERWES CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCHHHHCCCCCCCCHHEEEHHCCCC DAALAAHRQAAHMLAYRQNAAGLIESVEVRVMQRVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEVAVVATIIAKPGMEDALFEQLGTIIGPTRVEQGALQYDLHRDRDDPRRFVFFERWES CCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCHHHHCCCCCCCCHHEEEHHCCCC DAALAAHRQAAHMLAYRQNAAGLIESVEVRVMQRVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA