Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027593
Identifier: 238027593
GI number: 238027593
Start: 2204496
End: 2204813
Strand: Reverse
Name: 238027593
Synonym: bglu_1g20110
Alternate gene names: NA
Gene position: 2204813-2204496 (Counterclockwise)
Preceding gene: 238027597
Following gene: 238027590
Centisome position: 56.44
GC content: 66.67
Gene sequence:
>318_bases ATGGCCACGTATTCCAACGAAGCAGTGCTCGATGCCCTGCGGCGGGTGCAGTACCGGCAGGTCCCGTGGGCACGGCGCCC GAACGTCTTCGAATACCTTCGCAACCTTGGACTGATGGACACGGTGCGCCAAAAGACCGTGGCACCGGCTCCGGGCTTTC ATGCCCCGGTCGATATCGCGGTGCTCACGGAGTCGGGGCGCGCCGAGTTCGCTCGGCTCGAACGTGCCGAGCGTCTGCCG ACCTGGATCGATCGCCGCGCCGATGACTACGCGCTCAGCGAGGCCGGCGCCGTGTCGGTCCTCGAAAGCCGTCTGTAG
Upstream 100 bases:
>100_bases AAGGCGCAGGGGGATTACAGGCGGTGCCCACCTGTCCTTGCATGGCGGTGCCGGCTGGCGGGACCGCCTGCAGATCGCTG TACTTTGAGAAAGAGTCCAG
Downstream 100 bases:
>100_bases ATTCGGTTGCGCTGAAAAAAACGCCCGTATCGGGGGATACGGGCGATACCGGGTACATTTGGCTGTTGCCAGGACCGCTC ACATGGCTTTGGTGTGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MATYSNEAVLDALRRVQYRQVPWARRPNVFEYLRNLGLMDTVRQKTVAPAPGFHAPVDIAVLTESGRAEFARLERAERLP TWIDRRADDYALSEAGAVSVLESRL
Sequences:
>Translated_105_residues MATYSNEAVLDALRRVQYRQVPWARRPNVFEYLRNLGLMDTVRQKTVAPAPGFHAPVDIAVLTESGRAEFARLERAERLP TWIDRRADDYALSEAGAVSVLESRL >Mature_104_residues ATYSNEAVLDALRRVQYRQVPWARRPNVFEYLRNLGLMDTVRQKTVAPAPGFHAPVDIAVLTESGRAEFARLERAERLPT WIDRRADDYALSEAGAVSVLESRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11930; Mature: 11798
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYSNEAVLDALRRVQYRQVPWARRPNVFEYLRNLGLMDTVRQKTVAPAPGFHAPVDIA CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEE VLTESGRAEFARLERAERLPTWIDRRADDYALSEAGAVSVLESRL EEECCCHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ATYSNEAVLDALRRVQYRQVPWARRPNVFEYLRNLGLMDTVRQKTVAPAPGFHAPVDIA CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEE VLTESGRAEFARLERAERLPTWIDRRADDYALSEAGAVSVLESRL EEECCCHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA