Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027598

Identifier: 238027598

GI number: 238027598

Start: 2207491

End: 2208693

Strand: Reverse

Name: 238027598

Synonym: bglu_1g20160

Alternate gene names: NA

Gene position: 2208693-2207491 (Counterclockwise)

Preceding gene: 238027600

Following gene: 238027597

Centisome position: 56.54

GC content: 64.26

Gene sequence:

>1203_bases
ATGTCTGATCTTCGTCTTACCAAGCGGTTCGCGGTTGTGCTGGCAGTCGGTACGTTCGTGGCAGGGTGCAGTTCGCCGTC
GCCCACGAAAATCGATTACAAGAGCGATTCCAAGAACAAGGAGGTATCGCTCGCGGTCCCGCCGAACATGATGGACGAGA
CGGCCGATCAGCGGTCGCTGCCGCCGCAGGGCGGTGAAACGTCGCTGTCGAGTCTGCAGCAGACCCAGCGGGTCGCGCCG
ACCACCGATACGGTCGTGCCGCCTACGCAGGGCATGCACCTGCAGCGCGACGGCACCGAAAGCTGGCTCGTGATCGACCA
TCAGACGCCGGCCCAAGTCTGGCCGCAAGTGCGCCGCTTCTGGCAGGAACAGGGTTTCCTGCTCGTGGTCGACCAGCGCG
ACAAGGGCGTGATGGAAACCGACTGGAACGAAACGCGTCCGTCGATCAACCAGGGCTTGATTCGCGGCGTGATCTCGAAG
GCGATGGGCAATTCCTACGTCACGGCTGAGCGCAACAAGTACCGCACGCGCCTCGATACCGCGCCGAACGGCGGCACCTA
CGTGTTCATCAGCCAGAAGGGGATGCGCGAGGCGCTCACCGGACCGAACAATGATTCGAGCAAGTGGGAAATGCGGCCGA
ACGATCCGGGGCTCGAAACCGAATACCTGAAGCGGCTGATGGTCGTGCTTGCCCAGAACGACTCGCGCAAGGTGGCCGGC
GGCGACAAGGCCGCTACGGCGCCGGCGCCGGCCTCGGCAGTGAAGCCGGCCGGCGGCGACGCGGCGGCAGCCGCGGTGGC
AGCGCAGAACGTCACCAGTGTAGGCTCGCAAGGCCCGCGCAGCTCCAACGAAACGGCCGACGTGCCATCCGAAGTCATGC
TCGGCGAGCCGTATGATCGCTCGTGGCTGCGCGTGGGGCTCGCGCTCGATCGTGCGAATTTCACGGTTGACGATCGCGAC
CGCTCGAAGGGGCTCTACTACGTGCGCTACGTCGATCCGAAGGATCTGAGCTCGGCCGAGCAGGGGTTCTGGAGCCAGCT
CTTCCACGGAAAGAAGGAAAAGACGGCGAAGCAATACCTCGTCAACGTGAAGGCGCTGACGCAGGATCAGACGCGCGTCG
CGGTGGTCGATGCGAGCGGTAACATCGATATGTCCAGTCCCGCCCGCCAGATCATGGGGCTGCTCGCCGATCAGCTGCGC
TGA

Upstream 100 bases:

>100_bases
TGCGTGCGCTCTTTTTGCACTTGGCGGTGCGAGCCCGGTAAAATGCAATGTTGATCCACGGAAAAGTACCCGTGGCCACT
CGCGGAAGGATTCCCTGAAC

Downstream 100 bases:

>100_bases
CCACGCACCCGCGCTCCGGTTGCCAAGCCCGCCCGACGGCGGGCTTTTTCATTGGTGTCGTGGAAACGAGCGTGCGTTAC
GTAACGTTACTTGGTAACGC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSDLRLTKRFAVVLAVGTFVAGCSSPSPTKIDYKSDSKNKEVSLAVPPNMMDETADQRSLPPQGGETSLSSLQQTQRVAP
TTDTVVPPTQGMHLQRDGTESWLVIDHQTPAQVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETRPSINQGLIRGVISK
AMGNSYVTAERNKYRTRLDTAPNGGTYVFISQKGMREALTGPNNDSSKWEMRPNDPGLETEYLKRLMVVLAQNDSRKVAG
GDKAATAPAPASAVKPAGGDAAAAAVAAQNVTSVGSQGPRSSNETADVPSEVMLGEPYDRSWLRVGLALDRANFTVDDRD
RSKGLYYVRYVDPKDLSSAEQGFWSQLFHGKKEKTAKQYLVNVKALTQDQTRVAVVDASGNIDMSSPARQIMGLLADQLR

Sequences:

>Translated_400_residues
MSDLRLTKRFAVVLAVGTFVAGCSSPSPTKIDYKSDSKNKEVSLAVPPNMMDETADQRSLPPQGGETSLSSLQQTQRVAP
TTDTVVPPTQGMHLQRDGTESWLVIDHQTPAQVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETRPSINQGLIRGVISK
AMGNSYVTAERNKYRTRLDTAPNGGTYVFISQKGMREALTGPNNDSSKWEMRPNDPGLETEYLKRLMVVLAQNDSRKVAG
GDKAATAPAPASAVKPAGGDAAAAAVAAQNVTSVGSQGPRSSNETADVPSEVMLGEPYDRSWLRVGLALDRANFTVDDRD
RSKGLYYVRYVDPKDLSSAEQGFWSQLFHGKKEKTAKQYLVNVKALTQDQTRVAVVDASGNIDMSSPARQIMGLLADQLR
>Mature_399_residues
SDLRLTKRFAVVLAVGTFVAGCSSPSPTKIDYKSDSKNKEVSLAVPPNMMDETADQRSLPPQGGETSLSSLQQTQRVAPT
TDTVVPPTQGMHLQRDGTESWLVIDHQTPAQVWPQVRRFWQEQGFLLVVDQRDKGVMETDWNETRPSINQGLIRGVISKA
MGNSYVTAERNKYRTRLDTAPNGGTYVFISQKGMREALTGPNNDSSKWEMRPNDPGLETEYLKRLMVVLAQNDSRKVAGG
DKAATAPAPASAVKPAGGDAAAAAVAAQNVTSVGSQGPRSSNETADVPSEVMLGEPYDRSWLRVGLALDRANFTVDDRDR
SKGLYYVRYVDPKDLSSAEQGFWSQLFHGKKEKTAKQYLVNVKALTQDQTRVAVVDASGNIDMSSPARQIMGLLADQLR

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43778; Mature: 43646

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLRLTKRFAVVLAVGTFVAGCSSPSPTKIDYKSDSKNKEVSLAVPPNMMDETADQRSL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHCHHHCCC
PPQGGETSLSSLQQTQRVAPTTDTVVPPTQGMHLQRDGTESWLVIDHQTPAQVWPQVRRF
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHHH
WQEQGFLLVVDQRDKGVMETDWNETRPSINQGLIRGVISKAMGNSYVTAERNKYRTRLDT
HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCC
APNGGTYVFISQKGMREALTGPNNDSSKWEMRPNDPGLETEYLKRLMVVLAQNDSRKVAG
CCCCCEEEEEECCCCHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEECC
GDKAATAPAPASAVKPAGGDAAAAAVAAQNVTSVGSQGPRSSNETADVPSEVMLGEPYDR
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCC
SWLRVGLALDRANFTVDDRDRSKGLYYVRYVDPKDLSSAEQGFWSQLFHGKKEKTAKQYL
CCEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHH
VNVKALTQDQTRVAVVDASGNIDMSSPARQIMGLLADQLR
HHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLRLTKRFAVVLAVGTFVAGCSSPSPTKIDYKSDSKNKEVSLAVPPNMMDETADQRSL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHCHHHCCC
PPQGGETSLSSLQQTQRVAPTTDTVVPPTQGMHLQRDGTESWLVIDHQTPAQVWPQVRRF
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHHH
WQEQGFLLVVDQRDKGVMETDWNETRPSINQGLIRGVISKAMGNSYVTAERNKYRTRLDT
HHHCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCC
APNGGTYVFISQKGMREALTGPNNDSSKWEMRPNDPGLETEYLKRLMVVLAQNDSRKVAG
CCCCCEEEEEECCCCHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEECC
GDKAATAPAPASAVKPAGGDAAAAAVAAQNVTSVGSQGPRSSNETADVPSEVMLGEPYDR
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCC
SWLRVGLALDRANFTVDDRDRSKGLYYVRYVDPKDLSSAEQGFWSQLFHGKKEKTAKQYL
CCEEEEEEEECCCCEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHH
VNVKALTQDQTRVAVVDASGNIDMSSPARQIMGLLADQLR
HHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]