Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027555
Identifier: 238027555
GI number: 238027555
Start: 2157615
End: 2159477
Strand: Reverse
Name: 238027555
Synonym: bglu_1g19730
Alternate gene names: NA
Gene position: 2159477-2157615 (Counterclockwise)
Preceding gene: 238027556
Following gene: 238027554
Centisome position: 55.28
GC content: 69.24
Gene sequence:
>1863_bases ATGAAACCCGTCCAGACACGCCGCCCGCACCGGCCGATCCGTGCCGCCTTGCTCGTCGGGCGGCGCCGCGAGCGCGGCGC GTTCGCGATGATGACGATCATCTTCATGACGGTCATGATCGCCGTGCTCGGCATGCTCGATATCGGCAACGTGTTCTTTC AGCGCCGCGATCTGCAGCGCATCGCCGACATGGCGGCGCTGGCCGGCGTGCAGCGGCTCGATGCCACCTGCAGCCAGGCG CCCGTCAGCGCGAGCCGCAGCGCGGCCAGCAACGGCCTGAACACCGGCGCCGGCGACACCATCTCGGTCGGCTGCGGCCG CTGGGACCCGACCGCCAACCCCGCGCCGAGCTATTACGTGCCGGTCGCGAACCCGGGCGCGTCGAGCCCGGCCGTGCAGC TGAACGCGGTGCAGGTGGCGGTGTCGCGCCAGGTGCCGTATTTCTTCCTCGGGCCGTCCCGCACCGTGTATGCGATGTCG ACCTCGCGCGCGACCGCGATCGACGTGTTCTCGGTGGGGGCCACGCTCGCACAGCTGGGCGGCAACAGCTGCGCCGGCGC GCCGCCTTCGTCGAGCGCGAACCCGGGGCTCGTCAACGGGCTGCTCGGCGCGCTGCTCGGCGCCAAGTCGGGCCTGAACC TGACGCTCGCGTCGTATCAGGCGCTGGCCTGCACCAGTATCAAGCTCGGCGATCTCGCGGCGGCGGTCCAGGCGGGCACG ATGCAACAGCTGCTGGCCGCGAACCTGTCGCTGGGCCGGTTCCTGAACGTGGTGGCGAACGCGGCGAGTCAGACCAACGT GGTCAACGCGAACCTGCAGGCGGCCGTCGGCGCGCTGCAGACACTCGGCTCGGTCAACCAGAACTCCACCAATGTCAATG TCGGCGGCCCCGGCGGCGTGCTCAACGTGGCGCTGGCGGACATGCAGTCGGCCGCCGACGCCCAGGTCAACCTGCTCGAT CTGGTGATGGTGGCCGCCGAGATCGCCAACTCCAGCAGCGCCGTGATGCTCGACGTGCCGGCGCTTGCGCTCGGCGGCTT GACCGGCACGCAGCTGCAGGTGCAGATCATCAGTCCGCCGTCGATCGCCGTCGGCGAGGGCGGCAAGGACGCCAGCGGCA ACTGGCGCACCCAGGCCTCGACAGCCGCGGCCGGCATCTACCTGCTGGTCGATCTCGGCACGCAGACGCTGCCGATCGTC GGCCCGCTGCTGCAACTGCTCGGCGCCAACGTCGACGTCACGCTGCCGATCTACATCCAGGTCGGCACCGGCACCGCGGT GCTCGAATCGACCCAGTGCGCGCAGACCCCGCAGGCGAGCACGGCGACCATCACGGCGACGCCCGGCATCGCCAATCTCT GCATCGGCACGCCGCCGCTGAACAAGGGCATGCTGAACCTGTCGTCGCAGTACAGCTGCACGAATCCCGCGCAGATCGTC AATGCCAAGCTGAGCCTGCTGAACCTGCTCGGCCTCGTGCAACTGACGGTGTCGCTCTCGAACGTGTCGGTGAAGGTGCA GGGCGCACCGGCCACCCATGTGTTCAGCGGCGTGTCGGGGCTCGACTCGAATTATTGGACGGTCAATTCGAATGCACTCG GCTCGGCGACGGCCGGCGCGCTCGCGCAGCTGTCGAACGCCACCATCACGCCGAGCCTGGGTCTGCTGGGAGGCGCCATG TTCAGCGTGGGAGGCAATTTCGTGCCCACGCTGCTCGGCATCCTGACGTCCGCGCTGAGCCCGCTGCTGAACTCGCTCGA CGCCGTCGTCGTGCCGCTGCTGAACCTGCTCGGCGTGCAGGTCGGGGCGGCCACCGTCCACCAGATCTCGCTGAATTGCG GGGTCGCGCAGACCGTCTACTGA
Upstream 100 bases:
>100_bases AGCCGATCCCGACCTGGTTCACGTCGGTCCAGCGTTCGTCGGGCGGTGGTTCGTCGTCCGGCGCAGGCGAGCTGCCGTCG CAATAATCGTCGAGGCGATC
Downstream 100 bases:
>100_bases ATGCTCTGACTGGTATCCGATGAGAAATACACCTGCAATCGAGGGACTCGACCTGTATGTCTGGGAGGGCAAGGCGGACA TCGTCGACCGCGTCGCGCGC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MKPVQTRRPHRPIRAALLVGRRRERGAFAMMTIIFMTVMIAVLGMLDIGNVFFQRRDLQRIADMAALAGVQRLDATCSQA PVSASRSAASNGLNTGAGDTISVGCGRWDPTANPAPSYYVPVANPGASSPAVQLNAVQVAVSRQVPYFFLGPSRTVYAMS TSRATAIDVFSVGATLAQLGGNSCAGAPPSSSANPGLVNGLLGALLGAKSGLNLTLASYQALACTSIKLGDLAAAVQAGT MQQLLAANLSLGRFLNVVANAASQTNVVNANLQAAVGALQTLGSVNQNSTNVNVGGPGGVLNVALADMQSAADAQVNLLD LVMVAAEIANSSSAVMLDVPALALGGLTGTQLQVQIISPPSIAVGEGGKDASGNWRTQASTAAAGIYLLVDLGTQTLPIV GPLLQLLGANVDVTLPIYIQVGTGTAVLESTQCAQTPQASTATITATPGIANLCIGTPPLNKGMLNLSSQYSCTNPAQIV NAKLSLLNLLGLVQLTVSLSNVSVKVQGAPATHVFSGVSGLDSNYWTVNSNALGSATAGALAQLSNATITPSLGLLGGAM FSVGGNFVPTLLGILTSALSPLLNSLDAVVVPLLNLLGVQVGAATVHQISLNCGVAQTVY
Sequences:
>Translated_620_residues MKPVQTRRPHRPIRAALLVGRRRERGAFAMMTIIFMTVMIAVLGMLDIGNVFFQRRDLQRIADMAALAGVQRLDATCSQA PVSASRSAASNGLNTGAGDTISVGCGRWDPTANPAPSYYVPVANPGASSPAVQLNAVQVAVSRQVPYFFLGPSRTVYAMS TSRATAIDVFSVGATLAQLGGNSCAGAPPSSSANPGLVNGLLGALLGAKSGLNLTLASYQALACTSIKLGDLAAAVQAGT MQQLLAANLSLGRFLNVVANAASQTNVVNANLQAAVGALQTLGSVNQNSTNVNVGGPGGVLNVALADMQSAADAQVNLLD LVMVAAEIANSSSAVMLDVPALALGGLTGTQLQVQIISPPSIAVGEGGKDASGNWRTQASTAAAGIYLLVDLGTQTLPIV GPLLQLLGANVDVTLPIYIQVGTGTAVLESTQCAQTPQASTATITATPGIANLCIGTPPLNKGMLNLSSQYSCTNPAQIV NAKLSLLNLLGLVQLTVSLSNVSVKVQGAPATHVFSGVSGLDSNYWTVNSNALGSATAGALAQLSNATITPSLGLLGGAM FSVGGNFVPTLLGILTSALSPLLNSLDAVVVPLLNLLGVQVGAATVHQISLNCGVAQTVY >Mature_620_residues MKPVQTRRPHRPIRAALLVGRRRERGAFAMMTIIFMTVMIAVLGMLDIGNVFFQRRDLQRIADMAALAGVQRLDATCSQA PVSASRSAASNGLNTGAGDTISVGCGRWDPTANPAPSYYVPVANPGASSPAVQLNAVQVAVSRQVPYFFLGPSRTVYAMS TSRATAIDVFSVGATLAQLGGNSCAGAPPSSSANPGLVNGLLGALLGAKSGLNLTLASYQALACTSIKLGDLAAAVQAGT MQQLLAANLSLGRFLNVVANAASQTNVVNANLQAAVGALQTLGSVNQNSTNVNVGGPGGVLNVALADMQSAADAQVNLLD LVMVAAEIANSSSAVMLDVPALALGGLTGTQLQVQIISPPSIAVGEGGKDASGNWRTQASTAAAGIYLLVDLGTQTLPIV GPLLQLLGANVDVTLPIYIQVGTGTAVLESTQCAQTPQASTATITATPGIANLCIGTPPLNKGMLNLSSQYSCTNPAQIV NAKLSLLNLLGLVQLTVSLSNVSVKVQGAPATHVFSGVSGLDSNYWTVNSNALGSATAGALAQLSNATITPSLGLLGGAM FSVGGNFVPTLLGILTSALSPLLNSLDAVVVPLLNLLGVQVGAATVHQISLNCGVAQTVY
Specific function: Unknown
COG id: COG4655
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62679; Mature: 62679
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVQTRRPHRPIRAALLVGRRRERGAFAMMTIIFMTVMIAVLGMLDIGNVFFQRRDLQR CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADMAALAGVQRLDATCSQAPVSASRSAASNGLNTGAGDTISVGCGRWDPTANPAPSYYV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEE PVANPGASSPAVQLNAVQVAVSRQVPYFFLGPSRTVYAMSTSRATAIDVFSVGATLAQLG ECCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHC GNSCAGAPPSSSANPGLVNGLLGALLGAKSGLNLTLASYQALACTSIKLGDLAAAVQAGT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHH MQQLLAANLSLGRFLNVVANAASQTNVVNANLQAAVGALQTLGSVNQNSTNVNVGGPGGV HHHHHHHHCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC LNVALADMQSAADAQVNLLDLVMVAAEIANSSSAVMLDVPALALGGLTGTQLQVQIISPP HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEEEECCC SIAVGEGGKDASGNWRTQASTAAAGIYLLVDLGTQTLPIVGPLLQLLGANVDVTLPIYIQ CEEECCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEE VGTGTAVLESTQCAQTPQASTATITATPGIANLCIGTPPLNKGMLNLSSQYSCTNPAQIV ECCCCEEECCCHHCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHH NAKLSLLNLLGLVQLTVSLSNVSVKVQGAPATHVFSGVSGLDSNYWTVNSNALGSATAGA HHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHCCCCCCCCCEEECCCCCCCHHHHH LAQLSNATITPSLGLLGGAMFSVGGNFVPTLLGILTSALSPLLNSLDAVVVPLLNLLGVQ HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAATVHQISLNCGVAQTVY HCCCEEEEEEECCCCHHCCC >Mature Secondary Structure MKPVQTRRPHRPIRAALLVGRRRERGAFAMMTIIFMTVMIAVLGMLDIGNVFFQRRDLQR CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADMAALAGVQRLDATCSQAPVSASRSAASNGLNTGAGDTISVGCGRWDPTANPAPSYYV HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEEE PVANPGASSPAVQLNAVQVAVSRQVPYFFLGPSRTVYAMSTSRATAIDVFSVGATLAQLG ECCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHC GNSCAGAPPSSSANPGLVNGLLGALLGAKSGLNLTLASYQALACTSIKLGDLAAAVQAGT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHH MQQLLAANLSLGRFLNVVANAASQTNVVNANLQAAVGALQTLGSVNQNSTNVNVGGPGGV HHHHHHHHCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC LNVALADMQSAADAQVNLLDLVMVAAEIANSSSAVMLDVPALALGGLTGTQLQVQIISPP HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCEEEEEEECCC SIAVGEGGKDASGNWRTQASTAAAGIYLLVDLGTQTLPIVGPLLQLLGANVDVTLPIYIQ CEEECCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEE VGTGTAVLESTQCAQTPQASTATITATPGIANLCIGTPPLNKGMLNLSSQYSCTNPAQIV ECCCCEEECCCHHCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHH NAKLSLLNLLGLVQLTVSLSNVSVKVQGAPATHVFSGVSGLDSNYWTVNSNALGSATAGA HHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHCCCCCCCCCEEECCCCCCCHHHHH LAQLSNATITPSLGLLGGAMFSVGGNFVPTLLGILTSALSPLLNSLDAVVVPLLNLLGVQ HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGAATVHQISLNCGVAQTVY HCCCEEEEEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA