Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027556
Identifier: 238027556
GI number: 238027556
Start: 2159492
End: 2159998
Strand: Reverse
Name: 238027556
Synonym: bglu_1g19740
Alternate gene names: NA
Gene position: 2159998-2159492 (Counterclockwise)
Preceding gene: 238027557
Following gene: 238027555
Centisome position: 55.29
GC content: 74.56
Gene sequence:
>507_bases ATGCGATATTCCCAATCCTGGCGGCCGCGCGCGCGTGCATGGCATACCGCGTGGGTTGCGCTGGCGGCCCTGGCCGGCGC GGCGCCCGCCGCCTTCGCCCAGCCGGCCGCGGATCCGGCGCCGATGCGGTTGCAGCAGCAGTTGCAGCCGATCTCGGGCG CGCAACTGCAGGCATCGGCCGAGGCGTCGCCCGCCGCGCCGCAGGCGCGGGCCGCCGACGTGCCGCAGCCGGCGGCCGTG GCGCTGCCGCAGGCACAGCCGCAGCCGCCGCAGGTCAGCCATCGTGTCTCGGAGGTCGGCCCGGCGACCGCGGCCTGGTT CGACCTGCAGCGCAGCAATCGCGCGGCCGCTCCCGAGGCGCACCCGTTCGAGGGGGCGGCGGCATCGTCCGCCTACCAGC GCTATCTGCAATCGTTCGGCAAGCCGATCCCGACCTGGTTCACGTCGGTCCAGCGTTCGTCGGGCGGTGGTTCGTCGTCC GGCGCAGGCGAGCTGCCGTCGCAATAA
Upstream 100 bases:
>100_bases GCGCGGGCGGCGCGCCGATCGCGAGCAACGAGGGCTTCGACCTGGCCGCACCGCTGCTGCAGCGCTTCTCGCAAAAATGA TTTACCACACGGAGCCGACG
Downstream 100 bases:
>100_bases TCGTCGAGGCGATCATGAAACCCGTCCAGACACGCCGCCCGCACCGGCCGATCCGTGCCGCCTTGCTCGTCGGGCGGCGC CGCGAGCGCGGCGCGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRYSQSWRPRARAWHTAWVALAALAGAAPAAFAQPAADPAPMRLQQQLQPISGAQLQASAEASPAAPQARAADVPQPAAV ALPQAQPQPPQVSHRVSEVGPATAAWFDLQRSNRAAAPEAHPFEGAAASSAYQRYLQSFGKPIPTWFTSVQRSSGGGSSS GAGELPSQ
Sequences:
>Translated_168_residues MRYSQSWRPRARAWHTAWVALAALAGAAPAAFAQPAADPAPMRLQQQLQPISGAQLQASAEASPAAPQARAADVPQPAAV ALPQAQPQPPQVSHRVSEVGPATAAWFDLQRSNRAAAPEAHPFEGAAASSAYQRYLQSFGKPIPTWFTSVQRSSGGGSSS GAGELPSQ >Mature_168_residues MRYSQSWRPRARAWHTAWVALAALAGAAPAAFAQPAADPAPMRLQQQLQPISGAQLQASAEASPAAPQARAADVPQPAAV ALPQAQPQPPQVSHRVSEVGPATAAWFDLQRSNRAAAPEAHPFEGAAASSAYQRYLQSFGKPIPTWFTSVQRSSGGGSSS GAGELPSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17500; Mature: 17500
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSQSWRPRARAWHTAWVALAALAGAAPAAFAQPAADPAPMRLQQQLQPISGAQLQASA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEECCC EASPAAPQARAADVPQPAAVALPQAQPQPPQVSHRVSEVGPATAAWFDLQRSNRAAAPEA CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC HPFEGAAASSAYQRYLQSFGKPIPTWFTSVQRSSGGGSSSGAGELPSQ CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRYSQSWRPRARAWHTAWVALAALAGAAPAAFAQPAADPAPMRLQQQLQPISGAQLQASA CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEECCC EASPAAPQARAADVPQPAAVALPQAQPQPPQVSHRVSEVGPATAAWFDLQRSNRAAAPEA CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC HPFEGAAASSAYQRYLQSFGKPIPTWFTSVQRSSGGGSSSGAGELPSQ CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA