| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027518
Identifier: 238027518
GI number: 238027518
Start: 2118373
End: 2118828
Strand: Reverse
Name: 238027518
Synonym: bglu_1g19330
Alternate gene names: NA
Gene position: 2118828-2118373 (Counterclockwise)
Preceding gene: 238027519
Following gene: 238027517
Centisome position: 54.24
GC content: 61.62
Gene sequence:
>456_bases ATGACAGAGAACGAAGTTGATTTCTTTCCGCTGCGGGTGACGGGCGTGACCGCCACCGGCAAGCGACGCTTTGATCCAGA GGGTAAGCGCAAGCTGATCGAGGCCTGTATGCAGCCAGGTGCGTCGATTGCCGGACTTGCGCTGAAGGCCGGCGTCAACG CGAACCAACTGCATAAATGGATTCACTTGCGCGAGCGTACGAGCGGGACTGCGCTGACGACAACTCGTAAGCCGGCGCCA TCGGCATTCGTACCGGTCGTGACCGTCAACGACGTGATGTCCGTGGCGCAGCGCGCACCCGCGCCTGAATCGCCGAAGAA GAACCACTCGATAAGCTCCGCCGTGCAGGCTCGACTTTCGGCGCAGTTGCCCAATGGCGTGACGCTGCGACTCGAATGCG CAGCGCACGATGCCGCCCTCGTGCGAGCGATGATCGAAGCATTGGGAGTGCGCTAA
Upstream 100 bases:
>100_bases GCGACCTGATAAAACGTAAGCGCGAATTTAAGCGCACCTAGAATTCCCGGATGAATGCGCGCAGGCTTGCGTCCGCAACC ACAACTTGCGGACGCAACCT
Downstream 100 bases:
>100_bases TGTTTCGGCTCGACGCCGAATTGCGGGTCTACTTGCACCGCGATGCGATTGATTTCCGAGCCGGCATCAACAGCCTCGTG ATGCTGGTCGAGCAGTCGTT
Product: transposase IS3/IS911
Products: NA
Alternate protein names: Transposase; Transposase-Family Protein; Helix-Turn-Helix Fis-Type; Orf_Bo
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAP SAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR
Sequences:
>Translated_151_residues MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAP SAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR >Mature_150_residues TENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKWIHLRERTSGTALTTTRKPAPS AFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLSAQLPNGVTLRLECAAHDAALVRAMIEALGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16160; Mature: 16029
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKW CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHH IHLRERTSGTALTTTRKPAPSAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLS HHHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AQLPNGVTLRLECAAHDAALVRAMIEALGVR HCCCCCEEEEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure TENEVDFFPLRVTGVTATGKRRFDPEGKRKLIEACMQPGASIAGLALKAGVNANQLHKW CCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHH IHLRERTSGTALTTTRKPAPSAFVPVVTVNDVMSVAQRAPAPESPKKNHSISSAVQARLS HHHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH AQLPNGVTLRLECAAHDAALVRAMIEALGVR HCCCCCEEEEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA