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The map label for this gene is insF1 [C]

Identifier: 238027519

GI number: 238027519

Start: 2119142

End: 2119930

Strand: Reverse

Name: insF1 [C]

Synonym: bglu_1g19350

Alternate gene names: 238027519

Gene position: 2119930-2119142 (Counterclockwise)

Preceding gene: 238027520

Following gene: 238027518

Centisome position: 54.27

GC content: 61.47

Gene sequence:

>789_bases
TTGCGGATTGCCCCGTCGGGCTACCGACGCCATGCTGCGCGGCTTCGTGATCCGTCCAAACGCTGCGCTCGTGCCAAACG
CGATGAGGTCCTGCAACCCGAGATCAAGCGTGTCTGGCAGGCCAACATGCAGGTCTACGGTGTGCCGAAGGTCTGGAAGC
AGATGAACCGGGAGGGCATTGTGGTCGCACGCTGCACGGTCGGGCGGCTGATGAAGCTGCAGGGCTTGCGTGGCGCAGTT
CGCGGCAAGCGGGTTCGCACGACGAATCCCGATACGAGCGCTGCGCGCCCGCTGGACCGGGTCAACCGGCAGTTCAAGGC
TGAGCGCCCAAATCAGCTTTGGGTGTCTGACTTCACCTATGTCTCGACATGGCAGGGTTGGCTGTACGTGGCGTTCGTGA
TCGACGTGTTTGCCCGTCGCATCGTCGGTTGGCGCGTCAGTTCGTCGATGAGCACGGACTTCGTTCTGGATGCGCTCGAA
CAGGCGCTGTACGCGCGCCAACCGGGCGACGATGGGACCTTGATACACCACTCCGATAGGGGGGCTCAATACGTCAGCAT
TCGGTACAGCGAACGTTTGGCCGAGGCGGGTATCGAGCCGTCCGTCGGCAGCCGTGGCGACAGCTACGATAACGCGCTGG
CTGAAACGATCAACGGTCTCTACAAGACTGAACTGATTCATCGGCGCGCCCCTTGGAAAACGAGGGAATCCGTCGAACTG
GCAACGCTGGAATGGGTCGCCTGGTACAACCATCATCGGCTGATGTGTAGAAGTCGCGACCCGATCTGA

Upstream 100 bases:

>100_bases
CGTTTTTCGCCCAGGCGGAGCTCGACCGCCGATTCAAGTCCTGAAAGCCTTCGTTGATCAGCATCGCGACACCTTCGGGG
TCGAGCCGATCTGCAAGGTC

Downstream 100 bases:

>100_bases
CAGTTACCCGTTCCGACGGTGCGTGACTGTCAGATCAGATTCAGGTGGCTCACTTTCTCCTTCCACACCTCCTTGCCCGC
GATGAGCGTTTGCAAAGGCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGIVVARCTVGRLMKLQGLRGAV
RGKRVRTTNPDTSAARPLDRVNRQFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALE
QALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVEL
ATLEWVAWYNHHRLMCRSRDPI

Sequences:

>Translated_262_residues
MRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGIVVARCTVGRLMKLQGLRGAV
RGKRVRTTNPDTSAARPLDRVNRQFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALE
QALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVEL
ATLEWVAWYNHHRLMCRSRDPI
>Mature_262_residues
MRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGIVVARCTVGRLMKLQGLRGAV
RGKRVRTTNPDTSAARPLDRVNRQFKAERPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALE
QALYARQPGDDGTLIHHSDRGAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVEL
ATLEWVAWYNHHRLMCRSRDPI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=239, Percent_Identity=54.3933054393305, Blast_Score=250, Evalue=7e-67,
Organism=Escherichia coli, GI1788405, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1787263, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786753, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786570, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786490, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1789981, Length=252, Percent_Identity=30.1587301587302, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 30241; Mature: 30241

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGI
CCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECHHHHHHCCCCCE
VVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDRVNRQFKAERPNQLWVSDFTY
EEEECHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHHHHHHHHCCCCCEEEECCCHH
VSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALEQALYARQPGDDGTLIHHSDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCC
GAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVEL
CCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ATLEWVAWYNHHRLMCRSRDPI
HHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MRIAPSGYRRHAARLRDPSKRCARAKRDEVLQPEIKRVWQANMQVYGVPKVWKQMNREGI
CCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECHHHHHHCCCCCE
VVARCTVGRLMKLQGLRGAVRGKRVRTTNPDTSAARPLDRVNRQFKAERPNQLWVSDFTY
EEEECHHHHHHHHHHHHHHHCCCEEECCCCCCHHHCCHHHHHHHHHCCCCCEEEECCCHH
VSTWQGWLYVAFVIDVFARRIVGWRVSSSMSTDFVLDALEQALYARQPGDDGTLIHHSDR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCC
GAQYVSIRYSERLAEAGIEPSVGSRGDSYDNALAETINGLYKTELIHRRAPWKTRESVEL
CCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ATLEWVAWYNHHRLMCRSRDPI
HHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]