| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027517
Identifier: 238027517
GI number: 238027517
Start: 2118020
End: 2118373
Strand: Reverse
Name: 238027517
Synonym: bglu_1g19320
Alternate gene names: NA
Gene position: 2118373-2118020 (Counterclockwise)
Preceding gene: 238027518
Following gene: 238027516
Centisome position: 54.23
GC content: 59.6
Gene sequence:
>354_bases ATGTTTCGGCTCGACGCCGAATTGCGGGTCTACTTGCACCGCGATGCGATTGATTTCCGAGCCGGCATCAACAGCCTCGT GATGCTGGTCGAGCAGTCGTTACAGCTCGATCCGTTCGCGCGAGCGATATTCGCGTTCCGCAATCGCAAGCGCAATCGGG TCAAGCTGCTGCTGTATGAGCGCACCGGCTTCTGGCTCATGTTAAAGCGTCTTGAAGCGGACCACTTCGTCTGGCCCCAC CGAGAGCAAGCGGTGATCGAGTTGACGACCGAGCAGCTTCACTGGCTGCTCGACGGCATCGATATCGACGCCATGCAGCG ACACCCGGCGCGCCGGTATCGTCATGCGAGTTGA
Upstream 100 bases:
>100_bases TTTCGGCGCAGTTGCCCAATGGCGTGACGCTGCGACTCGAATGCGCAGCGCACGATGCCGCCCTCGTGCGAGCGATGATC GAAGCATTGGGAGTGCGCTA
Downstream 100 bases:
>100_bases AGGCGGCGCCAACTGATGTTGTCGGTAAACAACGCGCGCGACGGTTGTTGCCCATTTCCGTAAACCCACTGGGCGCGCCG CTCCGGTATGGTGAGCGGCA
Product: IS66 Orf2 like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS
Sequences:
>Translated_117_residues MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS >Mature_117_residues MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 34 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008878 [H]
Pfam domain/function: PF05717 Transposase_34 [H]
EC number: NA
Molecular weight: Translated: 14142; Mature: 14142
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYE CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEE RTGFWLMLKRLEADHFVWPHREQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS CCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHCCCHHHCCCCC >Mature Secondary Structure MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYE CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEE RTGFWLMLKRLEADHFVWPHREQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS CCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]