Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027517

Identifier: 238027517

GI number: 238027517

Start: 2118020

End: 2118373

Strand: Reverse

Name: 238027517

Synonym: bglu_1g19320

Alternate gene names: NA

Gene position: 2118373-2118020 (Counterclockwise)

Preceding gene: 238027518

Following gene: 238027516

Centisome position: 54.23

GC content: 59.6

Gene sequence:

>354_bases
ATGTTTCGGCTCGACGCCGAATTGCGGGTCTACTTGCACCGCGATGCGATTGATTTCCGAGCCGGCATCAACAGCCTCGT
GATGCTGGTCGAGCAGTCGTTACAGCTCGATCCGTTCGCGCGAGCGATATTCGCGTTCCGCAATCGCAAGCGCAATCGGG
TCAAGCTGCTGCTGTATGAGCGCACCGGCTTCTGGCTCATGTTAAAGCGTCTTGAAGCGGACCACTTCGTCTGGCCCCAC
CGAGAGCAAGCGGTGATCGAGTTGACGACCGAGCAGCTTCACTGGCTGCTCGACGGCATCGATATCGACGCCATGCAGCG
ACACCCGGCGCGCCGGTATCGTCATGCGAGTTGA

Upstream 100 bases:

>100_bases
TTTCGGCGCAGTTGCCCAATGGCGTGACGCTGCGACTCGAATGCGCAGCGCACGATGCCGCCCTCGTGCGAGCGATGATC
GAAGCATTGGGAGTGCGCTA

Downstream 100 bases:

>100_bases
AGGCGGCGCCAACTGATGTTGTCGGTAAACAACGCGCGCGACGGTTGTTGCCCATTTCCGTAAACCCACTGGGCGCGCCG
CTCCGGTATGGTGAGCGGCA

Product: IS66 Orf2 like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH
REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS

Sequences:

>Translated_117_residues
MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH
REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS
>Mature_117_residues
MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYERTGFWLMLKRLEADHFVWPH
REQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 34 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008878 [H]

Pfam domain/function: PF05717 Transposase_34 [H]

EC number: NA

Molecular weight: Translated: 14142; Mature: 14142

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYE
CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEE
RTGFWLMLKRLEADHFVWPHREQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS
CCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHCCCHHHCCCCC
>Mature Secondary Structure
MFRLDAELRVYLHRDAIDFRAGINSLVMLVEQSLQLDPFARAIFAFRNRKRNRVKLLLYE
CEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEE
RTGFWLMLKRLEADHFVWPHREQAVIELTTEQLHWLLDGIDIDAMQRHPARRYRHAS
CCCHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]