| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027220
Identifier: 238027220
GI number: 238027220
Start: 1758251
End: 1758454
Strand: Reverse
Name: 238027220
Synonym: bglu_1g16060
Alternate gene names: NA
Gene position: 1758454-1758251 (Counterclockwise)
Preceding gene: 238027221
Following gene: 238027215
Centisome position: 45.01
GC content: 63.73
Gene sequence:
>204_bases ATGAGCTCCAACCTTCACGACAAGCCGGACAGCCCCTGCATCGGCGTCTGCTCGACGCTCTTCGACGACGTCTGCAAGGG CTGCGGGCGCACCGCGCTCGAAGTCGCGAACTGGGTGTTCATGAGCGAGGACGAAAAAGCAGCGGTATGGGAGCGCATCA CGCGCGAGGGCACCGCGATGCGCTTCCAGTACGACAGGCTCTGA
Upstream 100 bases:
>100_bases TACAACCACCGCCAGCACTGGATCGCGCGCGTCGGCGTGAGCATCGCGCGCTGATGTTTTACCATAAGGCTTTGCCGCAT CCCTCGACCGCCACCCATCC
Downstream 100 bases:
>100_bases CGCGCACTGACGCGGCACGCCGCGGGGAGCGCACCGAGCGCCGCCTCATGCCTGGACCGCGGGACGAAAAAAGGCGGCAC GCGAGACAGCCGTGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSSNLHDKPDSPCIGVCSTLFDDVCKGCGRTALEVANWVFMSEDEKAAVWERITREGTAMRFQYDRL
Sequences:
>Translated_67_residues MSSNLHDKPDSPCIGVCSTLFDDVCKGCGRTALEVANWVFMSEDEKAAVWERITREGTAMRFQYDRL >Mature_66_residues SSNLHDKPDSPCIGVCSTLFDDVCKGCGRTALEVANWVFMSEDEKAAVWERITREGTAMRFQYDRL
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7589; Mature: 7457
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLHDKPDSPCIGVCSTLFDDVCKGCGRTALEVANWVFMSEDEKAAVWERITREGTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEE RFQYDRL EEECCCC >Mature Secondary Structure SSNLHDKPDSPCIGVCSTLFDDVCKGCGRTALEVANWVFMSEDEKAAVWERITREGTAM CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEE RFQYDRL EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA