| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is glxK [H]
Identifier: 238026971
GI number: 238026971
Start: 1478630
End: 1479784
Strand: Reverse
Name: glxK [H]
Synonym: bglu_1g13480
Alternate gene names: 238026971
Gene position: 1479784-1478630 (Counterclockwise)
Preceding gene: 238026977
Following gene: 238026970
Centisome position: 37.88
GC content: 74.37
Gene sequence:
>1155_bases ATGCAGCCCTTCCCGTCCGCGCCCGTCGTCGTCGTCGCGCCCGATTCGTTCAAGGGATCGTTGTCCGCGCAGCAGGTGGC CGAGGCGATCGCGGCCGGCATCATGCGTGCGCGGCCCGACGCGATCGTGCGCGCCTGCCCGATGGCCGACGGTGGCGAAG GCACGCTCGATGCGATGCTCGCGCATGGCGGCACGCGCCGCACGCTGCGCGTGGCGGGCGCGGCACTCGCGCCGCGCGAG GCCGCGGCCGGGCGGCTCGACGCGCGCTGCGCGATCCTCGAGACCGCCGAGATCGTCGGCATCACCGACCCGGTCGGCAT GGCGGTGCCGGTCGAGGCACGCAGCACGCGCGGCCTGGGCGAGGCGATCCGGCAGTTGCTCGACGAGGGTGTGCGCACGG TGTTCGTCGCGCTCGGCGGCAGCAGCACCAACGACGCGGGCGCAGGCATGCTGGCTGCGCTCGGCCTGCGCGCGCTCGAC ATCGACGGCCGCCCGTTCGAGCCGGTGCCGGCCAGGTTCGGCGAGATCGCGCGCCTCGACGCGTCGGGGCTCGATGCGCG GTTGGCCGACACGCAGTTCATCGCGATGTCCGACGTCGACAATCCGCTGACGGGCGAGCACGGCGCCACCGCGATCTTCG GTCCGCAGAAGGGCGTGCGGTCCGAGCAGGTCGCAACGCTCGACGCCGCGCTCGGGCGCTATGCCGACCTGGCCGAGGCG GCGCTCGGCCGCCAGCTGCGCGATCAGCCCGGCGCAGGCGCGGCTGGCGGCCTCGGCTTCGCGCTGCACCTGCTGGGCGC GCGCTTCGAGCCGGGCGCAGAAGTGGTGGCGCGCCAGATCGGCCTCGACGCCGCGCTCGACGGCGCGCACTGGCTGATCA CGGGCGAGGGCCGCTCGGACCGCCAGACCCTGCACGGCAAGGCGCCGTTCATCGCGTGCCGGCACGCGGCCGCCGCAGGC GTGCCGGCGAGCCTGCTGTCGGGGGCCGTCGACGCCGCCGCGCTGCCCCAATTATCAGAACATTTTGACGGCTGCTTTTC GCCGGCGCCGGGACCGATTACGCTCGAAGCCGCAATCCGCGACGCCGCGCGGCTGCTCGCCAACGAGGCCGAGCAACTGG CCCGGCTGCGCTTCGGCCGTTTATCGCCCCGTTGA
Upstream 100 bases:
>100_bases GCGCTGTTAAGCTCACGCGTGCCCCGCCGTCCGGCCCGTGCTGTCTGCGCGCGTGCCAGGGCTTGCGCCATCAAGCCACC CGATATCCAACGGAGACACC
Downstream 100 bases:
>100_bases CCGCGCGCGGCGATACGGGAACAATCGGGCCGCCGCCCTACTTCAGGAACCGCCATGAAAGGCAGCCAAGCCGGACTCGA ACAGTTTCTGACCCATCGCC
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MQPFPSAPVVVVAPDSFKGSLSAQQVAEAIAAGIMRARPDAIVRACPMADGGEGTLDAMLAHGGTRRTLRVAGAALAPRE AAAGRLDARCAILETAEIVGITDPVGMAVPVEARSTRGLGEAIRQLLDEGVRTVFVALGGSSTNDAGAGMLAALGLRALD IDGRPFEPVPARFGEIARLDASGLDARLADTQFIAMSDVDNPLTGEHGATAIFGPQKGVRSEQVATLDAALGRYADLAEA ALGRQLRDQPGAGAAGGLGFALHLLGARFEPGAEVVARQIGLDAALDGAHWLITGEGRSDRQTLHGKAPFIACRHAAAAG VPASLLSGAVDAAALPQLSEHFDGCFSPAPGPITLEAAIRDAARLLANEAEQLARLRFGRLSPR
Sequences:
>Translated_384_residues MQPFPSAPVVVVAPDSFKGSLSAQQVAEAIAAGIMRARPDAIVRACPMADGGEGTLDAMLAHGGTRRTLRVAGAALAPRE AAAGRLDARCAILETAEIVGITDPVGMAVPVEARSTRGLGEAIRQLLDEGVRTVFVALGGSSTNDAGAGMLAALGLRALD IDGRPFEPVPARFGEIARLDASGLDARLADTQFIAMSDVDNPLTGEHGATAIFGPQKGVRSEQVATLDAALGRYADLAEA ALGRQLRDQPGAGAAGGLGFALHLLGARFEPGAEVVARQIGLDAALDGAHWLITGEGRSDRQTLHGKAPFIACRHAAAAG VPASLLSGAVDAAALPQLSEHFDGCFSPAPGPITLEAAIRDAARLLANEAEQLARLRFGRLSPR >Mature_384_residues MQPFPSAPVVVVAPDSFKGSLSAQQVAEAIAAGIMRARPDAIVRACPMADGGEGTLDAMLAHGGTRRTLRVAGAALAPRE AAAGRLDARCAILETAEIVGITDPVGMAVPVEARSTRGLGEAIRQLLDEGVRTVFVALGGSSTNDAGAGMLAALGLRALD IDGRPFEPVPARFGEIARLDASGLDARLADTQFIAMSDVDNPLTGEHGATAIFGPQKGVRSEQVATLDAALGRYADLAEA ALGRQLRDQPGAGAAGGLGFALHLLGARFEPGAEVVARQIGLDAALDGAHWLITGEGRSDRQTLHGKAPFIACRHAAAAG VPASLLSGAVDAAALPQLSEHFDGCFSPAPGPITLEAAIRDAARLLANEAEQLARLRFGRLSPR
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=375, Percent_Identity=35.7333333333333, Blast_Score=189, Evalue=4e-49, Organism=Escherichia coli, GI1786724, Length=373, Percent_Identity=37.5335120643432, Blast_Score=181, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 39320; Mature: 39320
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPFPSAPVVVVAPDSFKGSLSAQQVAEAIAAGIMRARPDAIVRACPMADGGEGTLDAML CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCHHHHHH AHGGTRRTLRVAGAALAPREAAAGRLDARCAILETAEIVGITDPVGMAVPVEARSTRGLG HCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEHHHEEECCCCCCCEEECCCHHCCCHH EAIRQLLDEGVRTVFVALGGSSTNDAGAGMLAALGLRALDIDGRPFEPVPARFGEIARLD HHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCC ASGLDARLADTQFIAMSDVDNPLTGEHGATAIFGPQKGVRSEQVATLDAALGRYADLAEA CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALGRQLRDQPGAGAAGGLGFALHLLGARFEPGAEVVARQIGLDAALDGAHWLITGEGRSD HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCEEEEECCCCCC RQTLHGKAPFIACRHAAAAGVPASLLSGAVDAAALPQLSEHFDGCFSPAPGPITLEAAIR HHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DAARLLANEAEQLARLRFGRLSPR HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQPFPSAPVVVVAPDSFKGSLSAQQVAEAIAAGIMRARPDAIVRACPMADGGEGTLDAML CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCCHHHHHH AHGGTRRTLRVAGAALAPREAAAGRLDARCAILETAEIVGITDPVGMAVPVEARSTRGLG HCCCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEHHHEEECCCCCCCEEECCCHHCCCHH EAIRQLLDEGVRTVFVALGGSSTNDAGAGMLAALGLRALDIDGRPFEPVPARFGEIARLD HHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCC ASGLDARLADTQFIAMSDVDNPLTGEHGATAIFGPQKGVRSEQVATLDAALGRYADLAEA CCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALGRQLRDQPGAGAAGGLGFALHLLGARFEPGAEVVARQIGLDAALDGAHWLITGEGRSD HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCEEEEECCCCCC RQTLHGKAPFIACRHAAAAGVPASLLSGAVDAAALPQLSEHFDGCFSPAPGPITLEAAIR HHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH DAARLLANEAEQLARLRFGRLSPR HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]