| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026970
Identifier: 238026970
GI number: 238026970
Start: 1478126
End: 1478575
Strand: Reverse
Name: 238026970
Synonym: bglu_1g13470
Alternate gene names: NA
Gene position: 1478575-1478126 (Counterclockwise)
Preceding gene: 238026971
Following gene: 238026969
Centisome position: 37.85
GC content: 67.11
Gene sequence:
>450_bases ATGAAAGGCAGCCAAGCCGGACTCGAACAGTTTCTGACCCATCGCCTGCATACCATGAACAAGCTCACCGACCGCGCGCT CGGCGAGCTTTACCGCGACAAGCTCGGCATCACGCTGCCCGAGGCGCGCGTGATCAACGCAGTCGGCGCGTTCGGGCCGT TCTCGATCATGGAACTCGCGCGCCGCACGCAGCTCGACAAGAGCCAGGCGAGCCGCGCCGCGGAGGCGCTGATCCATCAG GGTCTGCTGTCGCGGGCCGCCAGCGAGGAGGACGGCCGCATGGTGGTGGTCGCGCTGACGCGCGACGGCGCCGCGCTGAA CCGCAAGATCATGACGCTCGCGCGACGCTGGAACGGCGATCTGGCCGAACGGCTCAGCGACAACGAACGCGCGGCGCTGG AACGCGCGCTCGACAAGCTGATCGCTTACACGCGCGAGCGGATCGAATAA
Upstream 100 bases:
>100_bases CGAGCAACTGGCCCGGCTGCGCTTCGGCCGTTTATCGCCCCGTTGACCGCGCGCGGCGATACGGGAACAATCGGGCCGCC GCCCTACTTCAGGAACCGCC
Downstream 100 bases:
>100_bases GCGCGCACAAGCGCGCGCGCGGACCTGCCAGCGGGCCGCTCGCATCGGCGAACCGCGCGTCGCGTCCGGTGTGCCATATG CCGCCCGCCGCGCACTGCGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Protein; Transcription Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR/EmrR Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE
Sequences:
>Translated_149_residues MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE >Mature_149_residues MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16641
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH RRTQLDKSQASRAAEALIHQGLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGD HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHH LAERLSDNERAALERALDKLIAYTRERIE HHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH RRTQLDKSQASRAAEALIHQGLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGD HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHH LAERLSDNERAALERALDKLIAYTRERIE HHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA