Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026970

Identifier: 238026970

GI number: 238026970

Start: 1478126

End: 1478575

Strand: Reverse

Name: 238026970

Synonym: bglu_1g13470

Alternate gene names: NA

Gene position: 1478575-1478126 (Counterclockwise)

Preceding gene: 238026971

Following gene: 238026969

Centisome position: 37.85

GC content: 67.11

Gene sequence:

>450_bases
ATGAAAGGCAGCCAAGCCGGACTCGAACAGTTTCTGACCCATCGCCTGCATACCATGAACAAGCTCACCGACCGCGCGCT
CGGCGAGCTTTACCGCGACAAGCTCGGCATCACGCTGCCCGAGGCGCGCGTGATCAACGCAGTCGGCGCGTTCGGGCCGT
TCTCGATCATGGAACTCGCGCGCCGCACGCAGCTCGACAAGAGCCAGGCGAGCCGCGCCGCGGAGGCGCTGATCCATCAG
GGTCTGCTGTCGCGGGCCGCCAGCGAGGAGGACGGCCGCATGGTGGTGGTCGCGCTGACGCGCGACGGCGCCGCGCTGAA
CCGCAAGATCATGACGCTCGCGCGACGCTGGAACGGCGATCTGGCCGAACGGCTCAGCGACAACGAACGCGCGGCGCTGG
AACGCGCGCTCGACAAGCTGATCGCTTACACGCGCGAGCGGATCGAATAA

Upstream 100 bases:

>100_bases
CGAGCAACTGGCCCGGCTGCGCTTCGGCCGTTTATCGCCCCGTTGACCGCGCGCGGCGATACGGGAACAATCGGGCCGCC
GCCCTACTTCAGGAACCGCC

Downstream 100 bases:

>100_bases
GCGCGCACAAGCGCGCGCGCGGACCTGCCAGCGGGCCGCTCGCATCGGCGAACCGCGCGTCGCGTCCGGTGTGCCATATG
CCGCCCGCCGCGCACTGCGC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Protein; Transcription Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator MarR/EmrR Family; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ
GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE

Sequences:

>Translated_149_residues
MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ
GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE
>Mature_149_residues
MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELARRTQLDKSQASRAAEALIHQ
GLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGDLAERLSDNERAALERALDKLIAYTRERIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
RRTQLDKSQASRAAEALIHQGLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHH
LAERLSDNERAALERALDKLIAYTRERIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSQAGLEQFLTHRLHTMNKLTDRALGELYRDKLGITLPEARVINAVGAFGPFSIMELA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH
RRTQLDKSQASRAAEALIHQGLLSRAASEEDGRMVVVALTRDGAALNRKIMTLARRWNGD
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCHH
LAERLSDNERAALERALDKLIAYTRERIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA