Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is btuE [C]
Identifier: 238026887
GI number: 238026887
Start: 1373954
End: 1374433
Strand: Direct
Name: btuE [C]
Synonym: bglu_1g12550
Alternate gene names: 238026887
Gene position: 1373954-1374433 (Clockwise)
Preceding gene: 238026885
Following gene: 238026894
Centisome position: 35.17
GC content: 66.25
Gene sequence:
>480_bases ATGTCGACACTCTATTCATTCAGCGCCAACGCGCTCGGCGGCGGCGAGGTCTCGCTCGATGCCTATCGCGGCAAGGTGCT GCTGATCGTCAACACCGCGAGCGAATGCGGGTTCACGCCGCAGTACGCGGGCCTGCAGCAGCTGCACGAGCGCTTCGGCG CGCGCGGGCTGGCCGTGCTCGGCTTCCCGTGCAACCAGTTCGGCGGCCAGGAGCCCGGCGACGCCGCGCAGATCGGCGCG TTCTGCGAGCAGCGCTTCGGCGTCACGTTCCCGCTGTTCGAGAAGATCGACGTGAAGGGCGAGCATGCGCATCCGCTGTT CCGCTACCTGACCGACGAGGCGCCGGGCCTGCTCGGCACCAAGATGATCAAGTGGAATTTCACGAAGTTCCTGGCGGACC GCAGCGGCAACGTCGTCAAGCGCTACGCGCCGCAGACCAAGCCCGACGAGATCGCCGAGGACATCGAAAAGCTGCTGTGA
Upstream 100 bases:
>100_bases GACGGTTTCGCATAGACTGCGTGACGGGCGGCGGCCGGTCGCCGCGTTTCGAAACGCCGCCGCAGTTCCCATTCGCCCAT ATCCGTCAGGAGGCAAACCG
Downstream 100 bases:
>100_bases GCTGCCCGGCGGCGCGGTGCCGGGGCCGGGGCCGGGGCGGCTCAGAGGATCGGCGCGAACAGCCGCGCGACGTGTATCAG CATGCGCCGCCAGGCGCCCG
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSTLYSFSANALGGGEVSLDAYRGKVLLIVNTASECGFTPQYAGLQQLHERFGARGLAVLGFPCNQFGGQEPGDAAQIGA FCEQRFGVTFPLFEKIDVKGEHAHPLFRYLTDEAPGLLGTKMIKWNFTKFLADRSGNVVKRYAPQTKPDEIAEDIEKLL
Sequences:
>Translated_159_residues MSTLYSFSANALGGGEVSLDAYRGKVLLIVNTASECGFTPQYAGLQQLHERFGARGLAVLGFPCNQFGGQEPGDAAQIGA FCEQRFGVTFPLFEKIDVKGEHAHPLFRYLTDEAPGLLGTKMIKWNFTKFLADRSGNVVKRYAPQTKPDEIAEDIEKLL >Mature_158_residues STLYSFSANALGGGEVSLDAYRGKVLLIVNTASECGFTPQYAGLQQLHERFGARGLAVLGFPCNQFGGQEPGDAAQIGAF CEQRFGVTFPLFEKIDVKGEHAHPLFRYLTDEAPGLLGTKMIKWNFTKFLADRSGNVVKRYAPQTKPDEIAEDIEKLL
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI192455698, Length=160, Percent_Identity=40.625, Blast_Score=134, Evalue=3e-32, Organism=Homo sapiens, GI75709200, Length=156, Percent_Identity=45.5128205128205, Blast_Score=133, Evalue=6e-32, Organism=Homo sapiens, GI90903240, Length=156, Percent_Identity=45.5128205128205, Blast_Score=133, Evalue=7e-32, Organism=Homo sapiens, GI15618997, Length=157, Percent_Identity=43.9490445859873, Blast_Score=129, Evalue=1e-30, Organism=Homo sapiens, GI41406084, Length=182, Percent_Identity=42.8571428571429, Blast_Score=110, Evalue=4e-25, Organism=Homo sapiens, GI90903238, Length=131, Percent_Identity=45.0381679389313, Blast_Score=107, Evalue=3e-24, Organism=Homo sapiens, GI4557629, Length=173, Percent_Identity=39.8843930635838, Blast_Score=106, Evalue=7e-24, Organism=Homo sapiens, GI6006001, Length=173, Percent_Identity=36.9942196531792, Blast_Score=97, Evalue=5e-21, Organism=Homo sapiens, GI32967607, Length=181, Percent_Identity=35.9116022099448, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI33186887, Length=177, Percent_Identity=35.5932203389831, Blast_Score=90, Evalue=8e-19, Organism=Homo sapiens, GI41406082, Length=70, Percent_Identity=58.5714285714286, Blast_Score=73, Evalue=9e-14, Organism=Escherichia coli, GI1788003, Length=156, Percent_Identity=42.9487179487179, Blast_Score=134, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17506887, Length=160, Percent_Identity=46.25, Blast_Score=152, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17535473, Length=160, Percent_Identity=44.375, Blast_Score=144, Evalue=2e-35, Organism=Caenorhabditis elegans, GI193210707, Length=162, Percent_Identity=45.0617283950617, Blast_Score=130, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=38.6075949367089, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17550320, Length=180, Percent_Identity=32.2222222222222, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI193209493, Length=180, Percent_Identity=30.5555555555556, Blast_Score=96, Evalue=7e-21, Organism=Caenorhabditis elegans, GI193210709, Length=72, Percent_Identity=50, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=35.7894736842105, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71999642, Length=76, Percent_Identity=36.8421052631579, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6319721, Length=158, Percent_Identity=48.1012658227848, Blast_Score=172, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322228, Length=159, Percent_Identity=47.7987421383648, Blast_Score=171, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6322826, Length=159, Percent_Identity=45.2830188679245, Blast_Score=160, Evalue=6e-41, Organism=Drosophila melanogaster, GI24656772, Length=160, Percent_Identity=46.25, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI24656777, Length=160, Percent_Identity=46.25, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI24656767, Length=160, Percent_Identity=46.25, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI85726443, Length=159, Percent_Identity=45.2830188679245, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17435; Mature: 17304
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLYSFSANALGGGEVSLDAYRGKVLLIVNTASECGFTPQYAGLQQLHERFGARGLAVL CCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHCCCCCCHHHHHHHHHHHCCCCEEEE GFPCNQFGGQEPGDAAQIGAFCEQRFGVTFPLFEKIDVKGEHAHPLFRYLTDEAPGLLGT ECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHH KMIKWNFTKFLADRSGNVVKRYAPQTKPDEIAEDIEKLL EEHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC >Mature Secondary Structure STLYSFSANALGGGEVSLDAYRGKVLLIVNTASECGFTPQYAGLQQLHERFGARGLAVL CCCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHCCCCCCHHHHHHHHHHHCCCCEEEE GFPCNQFGGQEPGDAAQIGAFCEQRFGVTFPLFEKIDVKGEHAHPLFRYLTDEAPGLLGT ECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHH KMIKWNFTKFLADRSGNVVKRYAPQTKPDEIAEDIEKLL EEHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]