| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026894
Identifier: 238026894
GI number: 238026894
Start: 1380957
End: 1381889
Strand: Direct
Name: 238026894
Synonym: bglu_1g12620
Alternate gene names: NA
Gene position: 1380957-1381889 (Clockwise)
Preceding gene: 238026887
Following gene: 238026895
Centisome position: 35.35
GC content: 72.67
Gene sequence:
>933_bases ATGATGGGCAATCAACGGTCGGCGCTGCCGACCCTCGCGATCCTGGTGGGCGCCTCGGTGTGGGGCCTCGTCTGGTACCC GCTGCGGCTGCTGGCGGGACAGGGGCTGACCGGCACCGCGGCCGGCGCGCTGACCTGCCTCTGTTCCTGCCTGTTCGTGG TGGTCTGGCGCCGCCGCTCGCTGCGCACGCTGCGCTGGCACTGGCTGTTGCTCGCGCTCGGCGCGGCTGCCGGCATCACC AACCTCGGCTTCGTCTGGGGCACGATCCACGGCCAGGTGCTGCGCGTGATGCTGCTGTTCTATCTGACCCCGGCCTGGAC CGCGATCTACGCGCATTTCCTGCTGCGCGACCGGCTCACCTGGGCCACCGCCGCGCTCGCGGCGCTGTCGATCTCGGGCG CGATGCTGATGCTCTGGTCGCCGGGGCTCGGCGCGCCGCTGCCGTCGAATCCGGCCGAATGGGCGGGGCTTGCCGCCGGT CTCAGTTTCGCGATGGGCAACGTGCTGTCGGTCCGGATCGCGCGCGATCTGCCCGAGCTGCGGCCCGAGATGCGCACCGC CACGCTGTTCGCGGGCGGTGCCGCGTTCAGCTTCGCCGCGATGTTCGTCGAGGGCGTGCCGCCGCTGCCGGCGCCGCATG CGCTCGGTGCGGCGCTCGGCATCGGTGCCGCGATCGGGGTGGTCACCGCGCTCAACAACGTGCTGGTGCAATACGGGCTT GCCCGGGTGCCGGCCAACCGCGCGTCGATCATCATGTTGTTCGAGATCGTCGTGACCGCGCTCTCGGCCTGGCTGTTCGC GGGCGAGCTGCCAGGCGCGCGCGAGTGGGCGGGCGGCGCCTGCATCGTGGCCGCGACCCTGCTGTCGGCCCGCGTCCACA AGGCCCCGGCCGGCGACGCGGACGGCCGGGACGGTGCGCGCGCGATGGTATGA
Upstream 100 bases:
>100_bases GCCGGGCCGGCAGCCGGGCGATTATAGCGTGCCGTCGCCGGCGCGCGGTGCCCGCGGGCGGGCGGCAACCTCCAGGGGCG GACAGGGCGGAACAGCGGAA
Downstream 100 bases:
>100_bases TTGGACCGCTTGACGCGGCTCGCGGCACGACCGCGCGGCCGGTCGGCCCGATTTTCTTCGGAATGGGCGGCGCGCGCGAC GTGCCGCCGGTTGCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MMGNQRSALPTLAILVGASVWGLVWYPLRLLAGQGLTGTAAGALTCLCSCLFVVVWRRRSLRTLRWHWLLLALGAAAGIT NLGFVWGTIHGQVLRVMLLFYLTPAWTAIYAHFLLRDRLTWATAALAALSISGAMLMLWSPGLGAPLPSNPAEWAGLAAG LSFAMGNVLSVRIARDLPELRPEMRTATLFAGGAAFSFAAMFVEGVPPLPAPHALGAALGIGAAIGVVTALNNVLVQYGL ARVPANRASIIMLFEIVVTALSAWLFAGELPGAREWAGGACIVAATLLSARVHKAPAGDADGRDGARAMV
Sequences:
>Translated_310_residues MMGNQRSALPTLAILVGASVWGLVWYPLRLLAGQGLTGTAAGALTCLCSCLFVVVWRRRSLRTLRWHWLLLALGAAAGIT NLGFVWGTIHGQVLRVMLLFYLTPAWTAIYAHFLLRDRLTWATAALAALSISGAMLMLWSPGLGAPLPSNPAEWAGLAAG LSFAMGNVLSVRIARDLPELRPEMRTATLFAGGAAFSFAAMFVEGVPPLPAPHALGAALGIGAAIGVVTALNNVLVQYGL ARVPANRASIIMLFEIVVTALSAWLFAGELPGAREWAGGACIVAATLLSARVHKAPAGDADGRDGARAMV >Mature_310_residues MMGNQRSALPTLAILVGASVWGLVWYPLRLLAGQGLTGTAAGALTCLCSCLFVVVWRRRSLRTLRWHWLLLALGAAAGIT NLGFVWGTIHGQVLRVMLLFYLTPAWTAIYAHFLLRDRLTWATAALAALSISGAMLMLWSPGLGAPLPSNPAEWAGLAAG LSFAMGNVLSVRIARDLPELRPEMRTATLFAGGAAFSFAAMFVEGVPPLPAPHALGAALGIGAAIGVVTALNNVLVQYGL ARVPANRASIIMLFEIVVTALSAWLFAGELPGAREWAGGACIVAATLLSARVHKAPAGDADGRDGARAMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32485; Mature: 32485
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGNQRSALPTLAILVGASVWGLVWYPLRLLAGQGLTGTAAGALTCLCSCLFVVVWRRRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRTLRWHWLLLALGAAAGITNLGFVWGTIHGQVLRVMLLFYLTPAWTAIYAHFLLRDRLT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WATAALAALSISGAMLMLWSPGLGAPLPSNPAEWAGLAAGLSFAMGNVLSVRIARDLPEL HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RPEMRTATLFAGGAAFSFAAMFVEGVPPLPAPHALGAALGIGAAIGVVTALNNVLVQYGL CHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVPANRASIIMLFEIVVTALSAWLFAGELPGAREWAGGACIVAATLLSARVHKAPAGDA HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCC DGRDGARAMV CCCCCCCCCC >Mature Secondary Structure MMGNQRSALPTLAILVGASVWGLVWYPLRLLAGQGLTGTAAGALTCLCSCLFVVVWRRRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRTLRWHWLLLALGAAAGITNLGFVWGTIHGQVLRVMLLFYLTPAWTAIYAHFLLRDRLT HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WATAALAALSISGAMLMLWSPGLGAPLPSNPAEWAGLAAGLSFAMGNVLSVRIARDLPEL HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RPEMRTATLFAGGAAFSFAAMFVEGVPPLPAPHALGAALGIGAAIGVVTALNNVLVQYGL CHHHHHHHHEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVPANRASIIMLFEIVVTALSAWLFAGELPGAREWAGGACIVAATLLSARVHKAPAGDA HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCC DGRDGARAMV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA