Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238026885
Identifier: 238026885
GI number: 238026885
Start: 1371521
End: 1371784
Strand: Direct
Name: 238026885
Synonym: bglu_1g12530
Alternate gene names: NA
Gene position: 1371521-1371784 (Clockwise)
Preceding gene: 238026884
Following gene: 238026887
Centisome position: 35.11
GC content: 69.32
Gene sequence:
>264_bases TTGAAACAGTCACAGCAAGCTGTCGGTCAGCATCTCTACAACCTGCGCGGCTGCCGCGTGTCGGAGCCGATCCGGCCGCC CTTCGGCCGGGGCTGCCGGATCGTGGAATGGGTCGATGACGAAGGGCGGATCGCGCGCCGCGTGGTGGCCGAGCACGTCA CCGAGGCGGAGGTGGTCGAGACGATACGCCGGCCGCTCGACGGGCGTCGCTACCTGATGCACGACGACGAGCAGATGCCG CGCGAGACCCTGCCGCGCCGCTGA
Upstream 100 bases:
>100_bases CGTTTCCATGCACCGCTGTAACTCGTCGCGCCGCGGTTTTCCCCTATGCTTGGCCGCATCGTGTCTCGCCGGTGTGGCCG GTCGGAAAGGAAACCCAACC
Downstream 100 bases:
>100_bases CCACGCGCCGGCCTGCGGGCGGGCGCGCCGCGGCCCTTGCTCAGCCGATCTGTTCCAGCTGTTCCTGAAGCTCGAGCCAG TCGAGTTCGAGCGCCTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKQSQQAVGQHLYNLRGCRVSEPIRPPFGRGCRIVEWVDDEGRIARRVVAEHVTEAEVVETIRRPLDGRRYLMHDDEQMP RETLPRR
Sequences:
>Translated_87_residues MKQSQQAVGQHLYNLRGCRVSEPIRPPFGRGCRIVEWVDDEGRIARRVVAEHVTEAEVVETIRRPLDGRRYLMHDDEQMP RETLPRR >Mature_87_residues MKQSQQAVGQHLYNLRGCRVSEPIRPPFGRGCRIVEWVDDEGRIARRVVAEHVTEAEVVETIRRPLDGRRYLMHDDEQMP RETLPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10250; Mature: 10250
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSQQAVGQHLYNLRGCRVSEPIRPPFGRGCRIVEWVDDEGRIARRVVAEHVTEAEVVE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHH TIRRPLDGRRYLMHDDEQMPRETLPRR HHHCCCCCCCCCCCCCCCCCHHCCCCC >Mature Secondary Structure MKQSQQAVGQHLYNLRGCRVSEPIRPPFGRGCRIVEWVDDEGRIARRVVAEHVTEAEVVE CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHH TIRRPLDGRRYLMHDDEQMPRETLPRR HHHCCCCCCCCCCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA