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The map label for this gene is alr [H]

Identifier: 238026883

GI number: 238026883

Start: 1368926

End: 1369996

Strand: Direct

Name: alr [H]

Synonym: bglu_1g12510

Alternate gene names: 238026883

Gene position: 1368926-1369996 (Clockwise)

Preceding gene: 238026880

Following gene: 238026884

Centisome position: 35.04

GC content: 71.24

Gene sequence:

>1071_bases
ATGCCGCGCCCGATTTCCGCCACGATTCATACCGCCGCACTTGCTAACAATCTCGCGGCCGCGCGCCGTTTCGCGCCGCG
CTCGAAGGTCTGGGCCGTCGTCAAGGCCAATGCCTACGGGCACGGCCTCGCGCGCGCGTTCCCCGGGCTGCGCGGCACCG
ACGGCTTCGGCCTGCTCGACGTCGACGAGGCGGTGCGCCTGCGCGAGCTGGGCTGGGCGGGGCCGATCCTGCTGCTCGAG
GGCTTCTTCCGCTCGACCGACGTGGACGTGATCGATCGCTACAGCCTTACCACCGCGCTGCATAACGACGATCAGATGCG
CATGCTCGAGACGGCGCGCCTGTCGAAGCCGGTCAACATCCTCTTGAAGATGAACAGCGGCATGAACCGGCTCGGCTATT
CGGTCGACAAGTATCGCGCGGCCTGGGAGCGTGCGCGGACCTGTCCCGGAATCGGCCAGATCACGCTGATGACGCACTTC
GCCGATGCCGACGGCGAGCGCGGCGTGGCCGCGCAGATGGCCGCGTTCGAGCGCGGCGCCGAGGGCATCGCCGGCGCGCG
CTGCCTCGCGAACTCGGCCGCCGTGATGTGGCACGCGCAAACCCATCACGACTGGGTGCGCCCCGGCATCCTGCTGTATG
GCGCCTCGCCCTCGGGCCGCGCGGCCGACATCGCCGACGCCGGGCTGCAGCCGGCCATGACGCTCGCCTCCGAGCTGATC
GCCGTGCAGTCGATCAAGGCGGGCGACGCGGTGGGTTACGGCGGCGCGTTCGTCGCCACGCAGGCGATGCGGATCGGCGT
GGTGGCCTGCGGCTATGCCGACGGCTATCCGCGGGTCGCGCCGGAGGGCACGCCGGTGCTGGTCGACGGGGTGCGCACGC
GGATCGTCGGACGCGTCTCGATGGACATGATCACGGTCGACCTGACGCCGGTGCCGCAGGCCGGGATCGGCGCGCGCGTC
GAGCTCTGGGGCCGCGCGCTGCCGGTCGACGACGTGGCCGCGCACTGCGCGACGGTGGGCTACGAACTGATGTGCGCGGT
GGCCCAGCGCGTGCCGGTTCGGGCGGAATAA

Upstream 100 bases:

>100_bases
CGACTAGCAAGAATCCCCGACCGCTGCTTGCTGCTCGCGTCACCGTGCCCACGAGGTGCGGTAAGCTGCTGATTCGCCTG
GGTCTTTATGACATTTCCTT

Downstream 100 bases:

>100_bases
GGGCGGGTTCGTGGCAAAACAGAAAACCGTCTACGTCTGTACTGCATGCGGCGGCCAGTCGCCGAAATGGCAGGGCCAGT
GCCCGGCCTGCCATGCCTGG

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MPRPISATIHTAALANNLAAARRFAPRSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDVDEAVRLRELGWAGPILLLE
GFFRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNILLKMNSGMNRLGYSVDKYRAAWERARTCPGIGQITLMTHF
ADADGERGVAAQMAAFERGAEGIAGARCLANSAAVMWHAQTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELI
AVQSIKAGDAVGYGGAFVATQAMRIGVVACGYADGYPRVAPEGTPVLVDGVRTRIVGRVSMDMITVDLTPVPQAGIGARV
ELWGRALPVDDVAAHCATVGYELMCAVAQRVPVRAE

Sequences:

>Translated_356_residues
MPRPISATIHTAALANNLAAARRFAPRSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDVDEAVRLRELGWAGPILLLE
GFFRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNILLKMNSGMNRLGYSVDKYRAAWERARTCPGIGQITLMTHF
ADADGERGVAAQMAAFERGAEGIAGARCLANSAAVMWHAQTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELI
AVQSIKAGDAVGYGGAFVATQAMRIGVVACGYADGYPRVAPEGTPVLVDGVRTRIVGRVSMDMITVDLTPVPQAGIGARV
ELWGRALPVDDVAAHCATVGYELMCAVAQRVPVRAE
>Mature_355_residues
PRPISATIHTAALANNLAAARRFAPRSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLDVDEAVRLRELGWAGPILLLEG
FFRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNILLKMNSGMNRLGYSVDKYRAAWERARTCPGIGQITLMTHFA
DADGERGVAAQMAAFERGAEGIAGARCLANSAAVMWHAQTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELIA
VQSIKAGDAVGYGGAFVATQAMRIGVVACGYADGYPRVAPEGTPVLVDGVRTRIVGRVSMDMITVDLTPVPQAGIGARVE
LWGRALPVDDVAAHCATVGYELMCAVAQRVPVRAE

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1787439, Length=353, Percent_Identity=57.2237960339943, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1790487, Length=352, Percent_Identity=45.7386363636364, Blast_Score=298, Evalue=5e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 37873; Mature: 37742

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPISATIHTAALANNLAAARRFAPRSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
VDEAVRLRELGWAGPILLLEGFFRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNI
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEE
LLKMNSGMNRLGYSVDKYRAAWERARTCPGIGQITLMTHFADADGERGVAAQMAAFERGA
EEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCC
EGIAGARCLANSAAVMWHAQTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELI
CCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHH
AVQSIKAGDAVGYGGAFVATQAMRIGVVACGYADGYPRVAPEGTPVLVDGVRTRIVGRVS
HHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEECCHHHHHEEEEE
MDMITVDLTPVPQAGIGARVELWGRALPVDDVAAHCATVGYELMCAVAQRVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PRPISATIHTAALANNLAAARRFAPRSKVWAVVKANAYGHGLARAFPGLRGTDGFGLLD
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEE
VDEAVRLRELGWAGPILLLEGFFRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNI
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEE
LLKMNSGMNRLGYSVDKYRAAWERARTCPGIGQITLMTHFADADGERGVAAQMAAFERGA
EEEECCCCHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCC
EGIAGARCLANSAAVMWHAQTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELI
CCCHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHH
AVQSIKAGDAVGYGGAFVATQAMRIGVVACGYADGYPRVAPEGTPVLVDGVRTRIVGRVS
HHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEECCHHHHHEEEEE
MDMITVDLTPVPQAGIGARVELWGRALPVDDVAAHCATVGYELMCAVAQRVPVRAE
EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA