Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026880

Identifier: 238026880

GI number: 238026880

Start: 1365243

End: 1366205

Strand: Direct

Name: 238026880

Synonym: bglu_1g12480

Alternate gene names: NA

Gene position: 1365243-1366205 (Clockwise)

Preceding gene: 238026879

Following gene: 238026883

Centisome position: 34.95

GC content: 76.01

Gene sequence:

>963_bases
ATGACCGCCGTCGTGCAGTCCGTACCGTGGGTCGGGCTGCGCGACACGGCGGTGCGCGATCTCGGCTGGCTGCTGGCCAG
CGCCGACCTGCTGGCGGCTTCGGCCGAGGCCCCGCTTGCGCGCCCGTGGCGCGGCCCGGGGGAGGCGGCGCGGATCGCCG
CCTGGCTGAGCGCGCTCGACGCCGATCCGGCGCCGCTGGCCGCCGCCCTGGGCGCGGCGCGGCCGACCCGGCTCGGCCGC
TACGCCGAGGCGCTGCTCGAATTCTTCGCCGCGCAGGCGCCGGCCTGGACGCTGGTCGCGGCGAACCTGCCGGTGCGCGT
GAGCGGCCGCACGCTCGGCGAATGCGACTTGCTGCTGGTCGCGCCCGACGGCGAGCGCCTGCACTGGGAGCTCGCCGTCA
AATGCTATCTTTGCGCCGCGCCCGACGGCACGGCCGCGCTGCGCGACTACGTCGGCCCGAATCTGGCCGACCGCTTCGAT
CTCAAATACCGCCGGCTCGTCGATCACCAGCTGCGCCTGAGTGCACGCGACGAATTCGCGTTCGCCGGCCAGCCGGGGCC
GTGGGCGGCGCGCATGCTCGTGAAGGGCTGGCTGTTCTACCGCGACGGCGCCGCCGTGACGGCGCCCGCGGCGCTCGACC
CGGCCCATTCGCGCGGCTTCTGGACGCCATGCGGCAACTGGCCGAGTCTCGCGGCGCGGCAGCCGGCCGGCACCAGCTGG
GTGGTGCTGCCGCGGCTCGCGTGGCTCGCGCCGCGGCGCTTCGAAGACGCGGGCCAGGACGGCGCGCTCGTGCCGCTCGA
CGCCACGACGCTGTTCGAGGCGGTGCGGGCGCGCCCGGCGCCGTGCTTGGTGGCAGCCGTGCGGCGCGGCGAGGATGGCG
CTTGGCACGAGATGCTGCGCGGCTTCATCGTCGACGACGGTTGGCCGGCGCGCGTGCACGCATTCGCCGCCCCGCAGCGG
TGA

Upstream 100 bases:

>100_bases
CCTACCTGCTGCGCAGCCTGCCCGACAAGGCGAAGGCCTGGGCCGATCTGTGCCTCGCGCGCGACACCATCGGCGGGGCG
GGCAAGGCGGCGGGCGACGC

Downstream 100 bases:

>100_bases
GGCGGGAAAGCTCGAGAGGAGCGCTGCCGGTCGGCCCGAGCCGTGCCGCGGCGTGGCGGCGATGCCCGGCCGCCGCCGAG
CGCATCAGGCGAGGGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MTAVVQSVPWVGLRDTAVRDLGWLLASADLLAASAEAPLARPWRGPGEAARIAAWLSALDADPAPLAAALGAARPTRLGR
YAEALLEFFAAQAPAWTLVAANLPVRVSGRTLGECDLLLVAPDGERLHWELAVKCYLCAAPDGTAALRDYVGPNLADRFD
LKYRRLVDHQLRLSARDEFAFAGQPGPWAARMLVKGWLFYRDGAAVTAPAALDPAHSRGFWTPCGNWPSLAARQPAGTSW
VVLPRLAWLAPRRFEDAGQDGALVPLDATTLFEAVRARPAPCLVAAVRRGEDGAWHEMLRGFIVDDGWPARVHAFAAPQR

Sequences:

>Translated_320_residues
MTAVVQSVPWVGLRDTAVRDLGWLLASADLLAASAEAPLARPWRGPGEAARIAAWLSALDADPAPLAAALGAARPTRLGR
YAEALLEFFAAQAPAWTLVAANLPVRVSGRTLGECDLLLVAPDGERLHWELAVKCYLCAAPDGTAALRDYVGPNLADRFD
LKYRRLVDHQLRLSARDEFAFAGQPGPWAARMLVKGWLFYRDGAAVTAPAALDPAHSRGFWTPCGNWPSLAARQPAGTSW
VVLPRLAWLAPRRFEDAGQDGALVPLDATTLFEAVRARPAPCLVAAVRRGEDGAWHEMLRGFIVDDGWPARVHAFAAPQR
>Mature_319_residues
TAVVQSVPWVGLRDTAVRDLGWLLASADLLAASAEAPLARPWRGPGEAARIAAWLSALDADPAPLAAALGAARPTRLGRY
AEALLEFFAAQAPAWTLVAANLPVRVSGRTLGECDLLLVAPDGERLHWELAVKCYLCAAPDGTAALRDYVGPNLADRFDL
KYRRLVDHQLRLSARDEFAFAGQPGPWAARMLVKGWLFYRDGAAVTAPAALDPAHSRGFWTPCGNWPSLAARQPAGTSWV
VLPRLAWLAPRRFEDAGQDGALVPLDATTLFEAVRARPAPCLVAAVRRGEDGAWHEMLRGFIVDDGWPARVHAFAAPQR

Specific function: Unknown

COG id: COG3782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34544; Mature: 34413

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVVQSVPWVGLRDTAVRDLGWLLASADLLAASAEAPLARPWRGPGEAARIAAWLSALD
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
ADPAPLAAALGAARPTRLGRYAEALLEFFAAQAPAWTLVAANLPVRVSGRTLGECDLLLV
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCEEEE
APDGERLHWELAVKCYLCAAPDGTAALRDYVGPNLADRFDLKYRRLVDHQLRLSARDEFA
CCCCCEEEEEEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
FAGQPGPWAARMLVKGWLFYRDGAAVTAPAALDPAHSRGFWTPCGNWPSLAARQPAGTSW
ECCCCCHHHHHHHHHHHEEEECCCCEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCE
VVLPRLAWLAPRRFEDAGQDGALVPLDATTLFEAVRARPAPCLVAAVRRGEDGAWHEMLR
EHHHHHHHHCCHHHHCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
GFIVDDGWPARVHAFAAPQR
HEECCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TAVVQSVPWVGLRDTAVRDLGWLLASADLLAASAEAPLARPWRGPGEAARIAAWLSALD
CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHC
ADPAPLAAALGAARPTRLGRYAEALLEFFAAQAPAWTLVAANLPVRVSGRTLGECDLLLV
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCEEEE
APDGERLHWELAVKCYLCAAPDGTAALRDYVGPNLADRFDLKYRRLVDHQLRLSARDEFA
CCCCCEEEEEEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
FAGQPGPWAARMLVKGWLFYRDGAAVTAPAALDPAHSRGFWTPCGNWPSLAARQPAGTSW
ECCCCCHHHHHHHHHHHEEEECCCCEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCE
VVLPRLAWLAPRRFEDAGQDGALVPLDATTLFEAVRARPAPCLVAAVRRGEDGAWHEMLR
EHHHHHHHHCCHHHHCCCCCCCEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
GFIVDDGWPARVHAFAAPQR
HEECCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA