| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026842
Identifier: 238026842
GI number: 238026842
Start: 1316479
End: 1316901
Strand: Direct
Name: 238026842
Synonym: bglu_1g12050
Alternate gene names: NA
Gene position: 1316479-1316901 (Clockwise)
Preceding gene: 238026841
Following gene: 238026843
Centisome position: 33.7
GC content: 65.96
Gene sequence:
>423_bases ATGAACACGTTCGATGAAGCAGCGCTGATTCGGGAGCTGACGCGGGACGAGGGGCGGCGGCTGAAGCCCTATGTCGACAC GGTCGGCAAGATCACGATCGGGGTGGGGCGGAACCTGACGGACGTCGGCATCAGCGATGACGAGTGCGATCTGCTGCTGA CTCACGACGTCGCGAGCGCGGTGGCCTGGCTGGATGCCGAGTTGCCTTGGTGGTGCAGGCTCGATCCAGTCCGGCAGCGG GTGGTCGTCAACATGGCGTTCAACCTCGGCGCCAAGCTATTGACGTTCAAGAACACGCTCGGCGCGATGGAGCGTGGCGA CTACGCCGTCGCCGCCGCGGGCATGCTGGCTTCGAAGTGGGCGCGGCAGGTTGGAGCGCGTGCGGATCGGCTCGCGGGAA TGATGCGAGCCGGCAGGGAGTGA
Upstream 100 bases:
>100_bases CTGATCGATACGCCGGAGACGACGATGCTGATCGGCATGTCGATCGTGATCGTTTGGGCTTTGGCTCGGAAAGTGTACTG GTGGAAGCGAGGAAAGAAGC
Downstream 100 bases:
>100_bases GCACGATGCTTCGGAAATGGGTTGTGTATCTGCTAGTCGCTGGAGTAGCGGCGGGCGCTGGTGCATATGGGGCGCACGTG TTCGACGCTCGCAACCTGGC
Product: lysozyme
Products: NA
Alternate protein names: Chain A; Family; Phage Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family; Phage Baseplate Hub Subunit And Tail Lysozyme
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE
Sequences:
>Translated_140_residues MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE >Mature_140_residues MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASAVAWLDAELPWWCRLDPVRQR VVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKWARQVGARADRLAGMMRAGRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15450; Mature: 15450
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASA CCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHH VAWLDAELPWWCRLDPVRQRVVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKW HHHHCCCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ARQVGARADRLAGMMRAGRE HHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MNTFDEAALIRELTRDEGRRLKPYVDTVGKITIGVGRNLTDVGISDDECDLLLTHDVASA CCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCCCCCCCCCEEEHHHHHHH VAWLDAELPWWCRLDPVRQRVVVNMAFNLGAKLLTFKNTLGAMERGDYAVAAAGMLASKW HHHHCCCCCCEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ARQVGARADRLAGMMRAGRE HHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA