| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026843
Identifier: 238026843
GI number: 238026843
Start: 1316907
End: 1317455
Strand: Direct
Name: 238026843
Synonym: bglu_1g12060
Alternate gene names: NA
Gene position: 1316907-1317455 (Clockwise)
Preceding gene: 238026842
Following gene: 238026844
Centisome position: 33.71
GC content: 64.48
Gene sequence:
>549_bases ATGCTTCGGAAATGGGTTGTGTATCTGCTAGTCGCTGGAGTAGCGGCGGGCGCTGGTGCATATGGGGCGCACGTGTTCGA CGCTCGCAACCTGGCCTTGGAGCGAGCCGGCCGGGCAGGCGACGCGCAGCATCATGCGGAGGACCTGCTCGCGATCTCCC GTGCGGCGCTTGATGCCGAGCGACTGGCGTCGGATGCACACGACGCCGCCGCGTCACGGGTGGCCGCCGTTGATGCCCAA ATGACCAAGGAGAGAATGGCTCATGAAACTGAGAATCGGAATGCTTGTGCTGCTTTGGCTGCTGGCACTGACCGGCTGCG CATCGCCGTCCGCAACTGTTCTGCAACCGGTTCCGACGACGTGCCCCGAGCTTCCGGCGCCGCCAGCATGGGCGATGGTG CCGCCGCCATTGCAGACCTCGACGGAGCGACTGCGGAACGCGCTTTCACCGTCGCCGGTGACGACCAGCGAGAAATCGAC AAATTGAGGGCGCTTCAGGCGTATGTGTGCGCGATTCGGACGGCAACGCCCGGTTGCGGCAATCGGTAA
Upstream 100 bases:
>100_bases TCGCCGCCGCGGGCATGCTGGCTTCGAAGTGGGCGCGGCAGGTTGGAGCGCGTGCGGATCGGCTCGCGGGAATGATGCGA GCCGGCAGGGAGTGAGCACG
Downstream 100 bases:
>100_bases CAGAATCACGAGTAGTAAGACAGGGCGACCAGCATCGGTGTAGCAGCACCGATGTGGCCACCCATCACTGAGCGTGCCAG TGACAGGCCGAGGCCCTGCC
Product: bacteriophage lysis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLRKWVVYLLVAGVAAGAGAYGAHVFDARNLALERAGRAGDAQHHAEDLLAISRAALDAERLASDAHDAAASRVAAVDAQ MTKERMAHETENRNACAALAAGTDRLRIAVRNCSATGSDDVPRASGAASMGDGAAAIADLDGATAERAFTVAGDDQREID KLRALQAYVCAIRTATPGCGNR
Sequences:
>Translated_182_residues MLRKWVVYLLVAGVAAGAGAYGAHVFDARNLALERAGRAGDAQHHAEDLLAISRAALDAERLASDAHDAAASRVAAVDAQ MTKERMAHETENRNACAALAAGTDRLRIAVRNCSATGSDDVPRASGAASMGDGAAAIADLDGATAERAFTVAGDDQREID KLRALQAYVCAIRTATPGCGNR >Mature_182_residues MLRKWVVYLLVAGVAAGAGAYGAHVFDARNLALERAGRAGDAQHHAEDLLAISRAALDAERLASDAHDAAASRVAAVDAQ MTKERMAHETENRNACAALAAGTDRLRIAVRNCSATGSDDVPRASGAASMGDGAAAIADLDGATAERAFTVAGDDQREID KLRALQAYVCAIRTATPGCGNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18814; Mature: 18814
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKWVVYLLVAGVAAGAGAYGAHVFDARNLALERAGRAGDAQHHAEDLLAISRAALDAE CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RLASDAHDAAASRVAAVDAQMTKERMAHETENRNACAALAAGTDRLRIAVRNCSATGSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCCCCCC VPRASGAASMGDGAAAIADLDGATAERAFTVAGDDQREIDKLRALQAYVCAIRTATPGCG CCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC NR CC >Mature Secondary Structure MLRKWVVYLLVAGVAAGAGAYGAHVFDARNLALERAGRAGDAQHHAEDLLAISRAALDAE CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RLASDAHDAAASRVAAVDAQMTKERMAHETENRNACAALAAGTDRLRIAVRNCSATGSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCCCCCC VPRASGAASMGDGAAAIADLDGATAERAFTVAGDDQREIDKLRALQAYVCAIRTATPGCG CCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC NR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA