| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026829
Identifier: 238026829
GI number: 238026829
Start: 1304673
End: 1305008
Strand: Reverse
Name: 238026829
Synonym: bglu_1g11890
Alternate gene names: NA
Gene position: 1305008-1304673 (Counterclockwise)
Preceding gene: 238026830
Following gene: 238026828
Centisome position: 33.41
GC content: 68.45
Gene sequence:
>336_bases ATGACTTCATCGAACCCTCCGTCCGCCGGCGCGGCGCCTTCCGCGCTCTACACCCAACTGCTCGGCGAAACCGCGAAGAT CGACTGGTGCGATCTCGAACGCTTCTTCGCGCAGGGCAAGCTGCTGTCGGTCGCGCGCGATCTCGATCTGGTCAGCGTCG CGGAGGCGATCGCTGCCGACCGCACCGAGCAGGTCACGCAGTGGCTCGCTGCCGGCCACGTGGCACGCATGCCCACCGAA CTCGCGCAGGACTACGCGGCACGCACGCCCGAGCTGTGGGCCGTGGTCGTGTCGCCATGGATCTGCGTGCAGGAGCGCGC ACCGGAACGCTCCTAG
Upstream 100 bases:
>100_bases ATGCGCTGCGACATACCGCTTGCCATCGTTCGTGCCTCGTCGCGCGCCTCATTCCGGCGGCACGCTGCGAGGGCCGCGCC CTGCCCCCAAACCTCCGCTC
Downstream 100 bases:
>100_bases GCGGCGCGATGTCGTCCTCCTCCGCGTTGTCCACCGGGGCCGCGGCCGGCCACGCCGGCGTCGGCCACCGCAGGGTGCTC GGCCTCGCCGTGCCGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MTSSNPPSAGAAPSALYTQLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIAADRTEQVTQWLAAGHVARMPTE LAQDYAARTPELWAVVVSPWICVQERAPERS
Sequences:
>Translated_111_residues MTSSNPPSAGAAPSALYTQLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIAADRTEQVTQWLAAGHVARMPTE LAQDYAARTPELWAVVVSPWICVQERAPERS >Mature_110_residues TSSNPPSAGAAPSALYTQLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIAADRTEQVTQWLAAGHVARMPTEL AQDYAARTPELWAVVVSPWICVQERAPERS
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12085; Mature: 11954
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSNPPSAGAAPSALYTQLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIAAD CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC RTEQVTQWLAAGHVARMPTELAQDYAARTPELWAVVVSPWICVQERAPERS CHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure TSSNPPSAGAAPSALYTQLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIAAD CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC RTEQVTQWLAAGHVARMPTELAQDYAARTPELWAVVVSPWICVQERAPERS CHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA