| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is osmY [C]
Identifier: 238026808
GI number: 238026808
Start: 1281623
End: 1282012
Strand: Direct
Name: osmY [C]
Synonym: bglu_1g11670
Alternate gene names: 238026808
Gene position: 1281623-1282012 (Clockwise)
Preceding gene: 238026807
Following gene: 238026809
Centisome position: 32.81
GC content: 73.59
Gene sequence:
>390_bases ATGAAGCCTCGCATCGCACGCCCGTTCCCGTCGACGCCGCGCCGGCGGCATCCGGGCCGCCGCCTTCTGGCGGCGGCGCT GACGGCGGCCACCGCGTTCTGCGCGGTCGCCGCGTTCGATGCGAACGCGGCCGGCGACACGCTTGCCTCGGCGTCGCACG CCGCCGGCGCGAAGCTGCACGACATGACCCTCATCACCGAGGCGAAGGCGGCACTGGTGCAGGCCAGCGGCCTCGACTCG GGCGACGTGCACGTCAGCGTCAAGGACGGCAACGTGACGCTCACGGGCAGCGTGCCCGACGAATCGCAGCGCCCGCTCGC GATCGCCGCCGTGAAGCGCGTGGACGGCGTGCGCGCGGTGCAGGACCAACTGACCATCCACGCGCGCTAG
Upstream 100 bases:
>100_bases AGCCGCGGCGCCGCGCGCGGCGCGGGCCTACGGCCGGGAACGGCGGTTGCGCTCCGGCAGAGACCGCCGGCGTCCGGCCG GCCCATCCAGGGAGACCCCG
Downstream 100 bases:
>100_bases GCACCGCTCGGCACGCCGCCGCCGGCGGGTTCGCACGTGATTCGCCGGTGACGGCCTCCGAGATTCCGTGATCGCGCCGC TGCCCGCGCGCCGGCCCGAT
Product: transport-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKPRIARPFPSTPRRRHPGRRLLAAALTAATAFCAVAAFDANAAGDTLASASHAAGAKLHDMTLITEAKAALVQASGLDS GDVHVSVKDGNVTLTGSVPDESQRPLAIAAVKRVDGVRAVQDQLTIHAR
Sequences:
>Translated_129_residues MKPRIARPFPSTPRRRHPGRRLLAAALTAATAFCAVAAFDANAAGDTLASASHAAGAKLHDMTLITEAKAALVQASGLDS GDVHVSVKDGNVTLTGSVPDESQRPLAIAAVKRVDGVRAVQDQLTIHAR >Mature_129_residues MKPRIARPFPSTPRRRHPGRRLLAAALTAATAFCAVAAFDANAAGDTLASASHAAGAKLHDMTLITEAKAALVQASGLDS GDVHVSVKDGNVTLTGSVPDESQRPLAIAAVKRVDGVRAVQDQLTIHAR
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13354; Mature: 13354
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRIARPFPSTPRRRHPGRRLLAAALTAATAFCAVAAFDANAAGDTLASASHAAGAKLH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEH DMTLITEAKAALVQASGLDSGDVHVSVKDGNVTLTGSVPDESQRPLAIAAVKRVDGVRAV HEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEHHHHHCCHHHH QDQLTIHAR HHCEEEECC >Mature Secondary Structure MKPRIARPFPSTPRRRHPGRRLLAAALTAATAFCAVAAFDANAAGDTLASASHAAGAKLH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEEH DMTLITEAKAALVQASGLDSGDVHVSVKDGNVTLTGSVPDESQRPLAIAAVKRVDGVRAV HEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEHHHHHCCHHHH QDQLTIHAR HHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA