Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026809

Identifier: 238026809

GI number: 238026809

Start: 1282138

End: 1282758

Strand: Direct

Name: 238026809

Synonym: bglu_1g11680

Alternate gene names: NA

Gene position: 1282138-1282758 (Clockwise)

Preceding gene: 238026808

Following gene: 238026810

Centisome position: 32.82

GC content: 71.66

Gene sequence:

>621_bases
ATGAAACGATCCAGCAGAGCATGGCGCGCGGCGGCGATTGCCGTCGCGCTCGGCATTCCCTTCGCGGCATCCGCCCAGAC
CAACCCGAACCCGACGCCGCACGCCCCGCCCGCGGCCGACCCGCGGGTCGGCGCGGAGATCGTCAAGCCGGCCTCGCCGG
TGGGCGACACCGATATCGCGAAGCGTCCGCAGGGCATCGATCCCGAGTTCGTCGACAAGGCCTCGCTGGCCGGCAAGCGC
GAGGTGCAGGCGAGCCAGCTCGCGATCGAGCGTTCGGCGTCGCCGGCGGTGCGCGAGTTCGCGAAGATGATGCTCGACGA
CCATGGCCGCGCCAACGAGCAGTTGCGCATGATTGCCGCCAAGCAGGGCGTGCCGGCGCAGGCGGCGAAGATCGTCGATC
CCGACGTGGAGGCGCTGCGCGGCAAGCAGGGCCACGATTTCGACGTCGCCTATCTGGCGGTGGCGGGGCCGGCCGCGCAC
CGGCAGGCGATCCGGCTGTTCGAGGCGCAGGCGCGCGGCGGCCATTCGAGCGAGCTGCGCGCGTTCGCGCAGCAGGGCCT
GCCGATGTTGCGCAAGCATCTGGCCGCCGCCCAGAAGCTCGCGCAGCAGGTGGGCAACTGA

Upstream 100 bases:

>100_bases
CGGGTTCGCACGTGATTCGCCGGTGACGGCCTCCGAGATTCCGTGATCGCGCCGCTGCCCGCGCGCCGGCCCGATCCGCA
ATGCGACCAGGAGAGCGATG

Downstream 100 bases:

>100_bases
GGCGCGGGCTTGGCGCGTGGCCGCGCCGCCGCCCGTTTCAGGCCGGCGGGAACGCCGGCATGCCAATGCCGAACAGGAGG
GAGGGTGCACGATGACGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein-Like Protein; Secreted Protein; Lipoprotein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKRSSRAWRAAAIAVALGIPFAASAQTNPNPTPHAPPAADPRVGAEIVKPASPVGDTDIAKRPQGIDPEFVDKASLAGKR
EVQASQLAIERSASPAVREFAKMMLDDHGRANEQLRMIAAKQGVPAQAAKIVDPDVEALRGKQGHDFDVAYLAVAGPAAH
RQAIRLFEAQARGGHSSELRAFAQQGLPMLRKHLAAAQKLAQQVGN

Sequences:

>Translated_206_residues
MKRSSRAWRAAAIAVALGIPFAASAQTNPNPTPHAPPAADPRVGAEIVKPASPVGDTDIAKRPQGIDPEFVDKASLAGKR
EVQASQLAIERSASPAVREFAKMMLDDHGRANEQLRMIAAKQGVPAQAAKIVDPDVEALRGKQGHDFDVAYLAVAGPAAH
RQAIRLFEAQARGGHSSELRAFAQQGLPMLRKHLAAAQKLAQQVGN
>Mature_206_residues
MKRSSRAWRAAAIAVALGIPFAASAQTNPNPTPHAPPAADPRVGAEIVKPASPVGDTDIAKRPQGIDPEFVDKASLAGKR
EVQASQLAIERSASPAVREFAKMMLDDHGRANEQLRMIAAKQGVPAQAAKIVDPDVEALRGKQGHDFDVAYLAVAGPAAH
RQAIRLFEAQARGGHSSELRAFAQQGLPMLRKHLAAAQKLAQQVGN

Specific function: Unknown

COG id: COG3652

COG function: function code S; Predicted outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21806; Mature: 21806

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSSRAWRAAAIAVALGIPFAASAQTNPNPTPHAPPAADPRVGAEIVKPASPVGDTDIA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH
KRPQGIDPEFVDKASLAGKREVQASQLAIERSASPAVREFAKMMLDDHGRANEQLRMIAA
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
KQGVPAQAAKIVDPDVEALRGKQGHDFDVAYLAVAGPAAHRQAIRLFEAQARGGHSSELR
HCCCCHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
AFAQQGLPMLRKHLAAAQKLAQQVGN
HHHHHCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRSSRAWRAAAIAVALGIPFAASAQTNPNPTPHAPPAADPRVGAEIVKPASPVGDTDIA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH
KRPQGIDPEFVDKASLAGKREVQASQLAIERSASPAVREFAKMMLDDHGRANEQLRMIAA
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
KQGVPAQAAKIVDPDVEALRGKQGHDFDVAYLAVAGPAAHRQAIRLFEAQARGGHSSELR
HCCCCHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
AFAQQGLPMLRKHLAAAQKLAQQVGN
HHHHHCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA