Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025515
Identifier: 238025515
GI number: 238025515
Start: 2744055
End: 2745173
Strand: Reverse
Name: 238025515
Synonym: bglu_2g22110
Alternate gene names: NA
Gene position: 2745173-2744055 (Counterclockwise)
Preceding gene: 238025516
Following gene: 238025512
Centisome position: 97.09
GC content: 70.33
Gene sequence:
>1119_bases ATGGCGGTAACGAGCGCGCGCGCATCGGCGCCGCCGCGTTCGGGCCGTCTGATCGAAATCGACTTCTTCCGCGGGATCGT GCTGCTGATGATCGTCGTCGACCACATCGGCGGCAGCCTCGTCTCCAAGGTCACGCTGCATGCGTTCGCGCTTTGCGACG CAGCCGAGGTGTTCGTGTTCCTCGGCGGCTTCGCGGCCGCGAGCGCGTTCCTCGCGATGTCCGAGCGGCATGGCGCCGAT GCCGCGCGGCGCCGCTTCGTGCGCCGCGCAGTGCAGATCTACCGCGCGTTCCTCGCCACCACCACGCTGATGCTGGTGGT CTCGGCCGTGCTCGACCACTACGGCATCGATTCGCCCAACATGGCGCTCGACGACGTCAGCCTGATGCTGGCCGCGCCGC TCACGGGCCTGGTGGAGGTGCTGACGTTCCAGCGCCAGCCCTACCTCGCCTCGGTGCTGCCGATGTACGTGCTGTTCGCG CTCGCGACGCCGGCCATCGTGCCGCTCGCGCGGCGGCATCCCGCTTGGCTGTGCGCGGCGAGCCTCGCGTCGTGGTTCGC CTCGGGCTGGCTCGGCACGCAACTGCTCGACACGCCCTCGTTCAAGTGGAGCTTCAACCCGTTCGCGTGGCAGCTGATGT TCGTGCTCGGCGCGCTGGCACGCTGCCAGCCGATCTATCGTGGCGTGGCGTCGCGCCCGCACGGCGCCGTGCTGACCGGC GTCGCGCTCGGCATCGTGGCGATCTGCGCCTACTACAAGCTGTTCTCGGGGCTGCCGCTGCCCGAGGGCGTGCTCAAGCG CGACCTGGCCTGGCCGCGCATCGTCAGCTTCATCGCGATCGCCTGGCTGATGGCGGATCTGGTGCGCCATGGCTGGGTCG GCCGGATCGCGCGCGCGGTGCGGCCGGTGGTGGCCGTCGGACAGCGCGGGCTGGTCTGCTACGTGGTGGGCACCGCGATT TCGCTGACGCTCGATTCGCTGCTGCATCGCGCCTCGATGAGTCCGCACTTCTCGCCGATCGAGATCGGCTTCGCGGCCGA CACGATCGCGCTCGGCGGGCTGCTGATGCTGGCCAGTTCGGGCGGCTGGTGGGCGCGGCTGCGGCGCGCGCCGGCATAG
Upstream 100 bases:
>100_bases GCGCCCTTCCCCCCGCCGTCACGCCGCTTGCGCGTGAGGCGCGTCCCCTGCTGCGTCGAGCGCCGCCGCATCGGCCGCAG CGCCGCCCCGGAGCGCCGTC
Downstream 100 bases:
>100_bases CGGGGGCGGCTGGGCCGCGATGAACGAACGGCGCGTGCGAGGCGCGCCGTTTGCATGGGCGGCAGGCGGCGCCGTGGGCC GATGTCGCGCGACCCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAVTSARASAPPRSGRLIEIDFFRGIVLLMIVVDHIGGSLVSKVTLHAFALCDAAEVFVFLGGFAAASAFLAMSERHGAD AARRRFVRRAVQIYRAFLATTTLMLVVSAVLDHYGIDSPNMALDDVSLMLAAPLTGLVEVLTFQRQPYLASVLPMYVLFA LATPAIVPLARRHPAWLCAASLASWFASGWLGTQLLDTPSFKWSFNPFAWQLMFVLGALARCQPIYRGVASRPHGAVLTG VALGIVAICAYYKLFSGLPLPEGVLKRDLAWPRIVSFIAIAWLMADLVRHGWVGRIARAVRPVVAVGQRGLVCYVVGTAI SLTLDSLLHRASMSPHFSPIEIGFAADTIALGGLLMLASSGGWWARLRRAPA
Sequences:
>Translated_372_residues MAVTSARASAPPRSGRLIEIDFFRGIVLLMIVVDHIGGSLVSKVTLHAFALCDAAEVFVFLGGFAAASAFLAMSERHGAD AARRRFVRRAVQIYRAFLATTTLMLVVSAVLDHYGIDSPNMALDDVSLMLAAPLTGLVEVLTFQRQPYLASVLPMYVLFA LATPAIVPLARRHPAWLCAASLASWFASGWLGTQLLDTPSFKWSFNPFAWQLMFVLGALARCQPIYRGVASRPHGAVLTG VALGIVAICAYYKLFSGLPLPEGVLKRDLAWPRIVSFIAIAWLMADLVRHGWVGRIARAVRPVVAVGQRGLVCYVVGTAI SLTLDSLLHRASMSPHFSPIEIGFAADTIALGGLLMLASSGGWWARLRRAPA >Mature_371_residues AVTSARASAPPRSGRLIEIDFFRGIVLLMIVVDHIGGSLVSKVTLHAFALCDAAEVFVFLGGFAAASAFLAMSERHGADA ARRRFVRRAVQIYRAFLATTTLMLVVSAVLDHYGIDSPNMALDDVSLMLAAPLTGLVEVLTFQRQPYLASVLPMYVLFAL ATPAIVPLARRHPAWLCAASLASWFASGWLGTQLLDTPSFKWSFNPFAWQLMFVLGALARCQPIYRGVASRPHGAVLTGV ALGIVAICAYYKLFSGLPLPEGVLKRDLAWPRIVSFIAIAWLMADLVRHGWVGRIARAVRPVVAVGQRGLVCYVVGTAIS LTLDSLLHRASMSPHFSPIEIGFAADTIALGGLLMLASSGGWWARLRRAPA
Specific function: Unknown
COG id: COG4645
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40153; Mature: 40022
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTSARASAPPRSGRLIEIDFFRGIVLLMIVVDHIGGSLVSKVTLHAFALCDAAEVFVF CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LGGFAAASAFLAMSERHGADAARRRFVRRAVQIYRAFLATTTLMLVVSAVLDHYGIDSPN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MALDDVSLMLAAPLTGLVEVLTFQRQPYLASVLPMYVLFALATPAIVPLARRHPAWLCAA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLASWFASGWLGTQLLDTPSFKWSFNPFAWQLMFVLGALARCQPIYRGVASRPHGAVLTG HHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VALGIVAICAYYKLFSGLPLPEGVLKRDLAWPRIVSFIAIAWLMADLVRHGWVGRIARAV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RPVVAVGQRGLVCYVVGTAISLTLDSLLHRASMSPHFSPIEIGFAADTIALGGLLMLASS HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCC GGWWARLRRAPA CCHHHHHHCCCC >Mature Secondary Structure AVTSARASAPPRSGRLIEIDFFRGIVLLMIVVDHIGGSLVSKVTLHAFALCDAAEVFVF CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LGGFAAASAFLAMSERHGADAARRRFVRRAVQIYRAFLATTTLMLVVSAVLDHYGIDSPN HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MALDDVSLMLAAPLTGLVEVLTFQRQPYLASVLPMYVLFALATPAIVPLARRHPAWLCAA CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SLASWFASGWLGTQLLDTPSFKWSFNPFAWQLMFVLGALARCQPIYRGVASRPHGAVLTG HHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VALGIVAICAYYKLFSGLPLPEGVLKRDLAWPRIVSFIAIAWLMADLVRHGWVGRIARAV HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RPVVAVGQRGLVCYVVGTAISLTLDSLLHRASMSPHFSPIEIGFAADTIALGGLLMLASS HHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCC GGWWARLRRAPA CCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA