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The map label for this gene is slyA [C]

Identifier: 238025454

GI number: 238025454

Start: 2664500

End: 2664988

Strand: Reverse

Name: slyA [C]

Synonym: bglu_2g21460

Alternate gene names: 238025454

Gene position: 2664988-2664500 (Counterclockwise)

Preceding gene: 238025455

Following gene: 238025453

Centisome position: 94.26

GC content: 68.1

Gene sequence:

>489_bases
ATGGAAGATTCTTTAATACACCCGTTGAAGCTGGTCAGCCTTACCACGCGTCTCTACACGCGCGTCGTCGACCGGCCGTT
GCGCGGACTTGGTTTCGCGATGAGCCAGGTGCCGGTGCTGAGCCTGCTCAAGACGGCGGGAGCGCTGTCGCAGGCGGAAC
TCGCGCGCCGCATGCAGGTCGAGCAGCCGAGCATGGCGCAGCTGCTGAACCGCATGGAGCGCGACGGGCTGGTCTGCCGC
GTGGCCGATCCGGCCGACAAGCGCAGCCGCCTGATCTCGCTGACCAACGATGCCGATTGCAAGCTGCCCGACGGCAAGGC
GGTGCTCGACGAGGCGAGCCGCGTCGCGCTCGACGGCTTCAGCGACGACGAGCGCCGGCAGCTGGCCGGACTGCTCGCGC
GCATGAACGCGAACCTCGATCGCGTGATTCAGACCGACGGCCTCGACCGCGCCACCTGCTGCTGCGCGGAAGAGGCGCAC
GCCGCCTGA

Upstream 100 bases:

>100_bases
GAGAGGTGCCCTGCTCTGGCCGCATGCGCGCGCAAACGGAAAACGGCGAATACACGATTCCCGTTTTGATAATCTCAATT
TTCGAGAGAACCTTCGCGAG

Downstream 100 bases:

>100_bases
ACGGCGTGCGCGGCGCGGCCTGCCGATGACGGCGGCCGTCCCGCCGGCTGGTCCGTGCCCGATATCGCTCGGAAAGGGCG
CGGCGGCACGCCGGATTGCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator Protein; Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEDSLIHPLKLVSLTTRLYTRVVDRPLRGLGFAMSQVPVLSLLKTAGALSQAELARRMQVEQPSMAQLLNRMERDGLVCR
VADPADKRSRLISLTNDADCKLPDGKAVLDEASRVALDGFSDDERRQLAGLLARMNANLDRVIQTDGLDRATCCCAEEAH
AA

Sequences:

>Translated_162_residues
MEDSLIHPLKLVSLTTRLYTRVVDRPLRGLGFAMSQVPVLSLLKTAGALSQAELARRMQVEQPSMAQLLNRMERDGLVCR
VADPADKRSRLISLTNDADCKLPDGKAVLDEASRVALDGFSDDERRQLAGLLARMNANLDRVIQTDGLDRATCCCAEEAH
AA
>Mature_162_residues
MEDSLIHPLKLVSLTTRLYTRVVDRPLRGLGFAMSQVPVLSLLKTAGALSQAELARRMQVEQPSMAQLLNRMERDGLVCR
VADPADKRSRLISLTNDADCKLPDGKAVLDEASRVALDGFSDDERRQLAGLLARMNANLDRVIQTDGLDRATCCCAEEAH
AA

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081950, Length=125, Percent_Identity=28, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17760; Mature: 17760

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDSLIHPLKLVSLTTRLYTRVVDRPLRGLGFAMSQVPVLSLLKTAGALSQAELARRMQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
EQPSMAQLLNRMERDGLVCRVADPADKRSRLISLTNDADCKLPDGKAVLDEASRVALDGF
CCCHHHHHHHHHHHCCCEEEECCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
SDDERRQLAGLLARMNANLDRVIQTDGLDRATCCCAEEAHAA
CCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEDSLIHPLKLVSLTTRLYTRVVDRPLRGLGFAMSQVPVLSLLKTAGALSQAELARRMQV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
EQPSMAQLLNRMERDGLVCRVADPADKRSRLISLTNDADCKLPDGKAVLDEASRVALDGF
CCCHHHHHHHHHHHCCCEEEECCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
SDDERRQLAGLLARMNANLDRVIQTDGLDRATCCCAEEAHAA
CCHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA