Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025455
Identifier: 238025455
GI number: 238025455
Start: 2665507
End: 2666076
Strand: Reverse
Name: 238025455
Synonym: bglu_2g21470
Alternate gene names: NA
Gene position: 2666076-2665507 (Counterclockwise)
Preceding gene: 238025456
Following gene: 238025454
Centisome position: 94.3
GC content: 77.89
Gene sequence:
>570_bases ATGAGATTCGAAATTCGCCGCGGCGGGCGCTGGGCGCTCGCCGCCGCCGCGGGTGCCGGCCTGCTCGGCGCCTGCGCGAT GGTGCCGCCCGGGCCCAGCGTGATGGCGCTGCCCGGCACCGGCAAGACGTTCGACCAGTTCCAGGTCGACGACGGCAACT GCCGCCAATACGCCGCCCGCCAGGTGGGCGGCGTGTCGTCGGATCAGGCCGCCGCCGCGAGCGCGCTCGGCAGCGCGGCG GTAGGCACCGCGCTTGGGGCGGCCGCCGGCGCGGCCTTCAACGGCGGCCGCGGCGCGGCGATCGGCGCGGGCGCCGGGCT GCTGGCCGGCAGCGTGGTCGGCATGGGCAGCGCGCAGGGCTCGGCCTACGACGTGCAGCGCCGCTACGACTCCGCCTACC TGCAATGCATGTACGCGGCCGGCGACCGCGTGCCGGTGCCGGGCCGCGTGCGCAGCCGCGACGACGAGGGCTACGGCGGC GGCTATGGAGGTGGTGGCGGCTATCGCGGCGGTCCCGCGCCGGGCGGCTACACGCCGCCGCCGCCGCCCGACATGCCGCC GCCGGACTGA
Upstream 100 bases:
>100_bases ACTGCAGCGCGTCGAAGCGTTACTACCCCTACGTGAAGACCTGCCCGTCAGGCTGGCGCGAAGTGCCGGCCCGCCCGCAA TGACCATGACGAGAACACCG
Downstream 100 bases:
>100_bases CCGGGCGCGGGCCGGCGCCTGCCGATGCCGCGCCTCATGCCGGGCGCCGCTATCGCGGCGCATCCGTCGTGAAGGCATGC CGAAGATTCGGCATGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRFEIRRGGRWALAAAAGAGLLGACAMVPPGPSVMALPGTGKTFDQFQVDDGNCRQYAARQVGGVSSDQAAAASALGSAA VGTALGAAAGAAFNGGRGAAIGAGAGLLAGSVVGMGSAQGSAYDVQRRYDSAYLQCMYAAGDRVPVPGRVRSRDDEGYGG GYGGGGGYRGGPAPGGYTPPPPPDMPPPD
Sequences:
>Translated_189_residues MRFEIRRGGRWALAAAAGAGLLGACAMVPPGPSVMALPGTGKTFDQFQVDDGNCRQYAARQVGGVSSDQAAAASALGSAA VGTALGAAAGAAFNGGRGAAIGAGAGLLAGSVVGMGSAQGSAYDVQRRYDSAYLQCMYAAGDRVPVPGRVRSRDDEGYGG GYGGGGGYRGGPAPGGYTPPPPPDMPPPD >Mature_189_residues MRFEIRRGGRWALAAAAGAGLLGACAMVPPGPSVMALPGTGKTFDQFQVDDGNCRQYAARQVGGVSSDQAAAASALGSAA VGTALGAAAGAAFNGGRGAAIGAGAGLLAGSVVGMGSAQGSAYDVQRRYDSAYLQCMYAAGDRVPVPGRVRSRDDEGYGG GYGGGGGYRGGPAPGGYTPPPPPDMPPPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18484; Mature: 18484
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEIRRGGRWALAAAAGAGLLGACAMVPPGPSVMALPGTGKTFDQFQVDDGNCRQYAAR CEEEECCCCCEEEEEHHCCCHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHH QVGGVSSDQAAAASALGSAAVGTALGAAAGAAFNGGRGAAIGAGAGLLAGSVVGMGSAQG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCC SAYDVQRRYDSAYLQCMYAAGDRVPVPGRVRSRDDEGYGGGYGGGGGYRGGPAPGGYTPP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPDMPPPD CCCCCCCCC >Mature Secondary Structure MRFEIRRGGRWALAAAAGAGLLGACAMVPPGPSVMALPGTGKTFDQFQVDDGNCRQYAAR CEEEECCCCCEEEEEHHCCCHHHHHCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHH QVGGVSSDQAAAASALGSAAVGTALGAAAGAAFNGGRGAAIGAGAGLLAGSVVGMGSAQG HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCC SAYDVQRRYDSAYLQCMYAAGDRVPVPGRVRSRDDEGYGGGYGGGGGYRGGPAPGGYTPP CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPPDMPPPD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA