Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is hspA [H]
Identifier: 238025368
GI number: 238025368
Start: 2531235
End: 2531780
Strand: Reverse
Name: hspA [H]
Synonym: bglu_2g20440
Alternate gene names: 238025368
Gene position: 2531780-2531235 (Counterclockwise)
Preceding gene: 238025369
Following gene: 238025367
Centisome position: 89.55
GC content: 65.57
Gene sequence:
>546_bases ATGAACGAATCCCACCACAAGCCATCGAACGGCGTACCCGCCGATCCCGTCGAGCGTGGCGCGCTCACGCGTTCGTTGCG TCATCCGCTCGAGACCCTGCGCCGCGAAATCGACCGCGTTTTCGACGATTTCGATCCGGCCGCGCGGCTGTCGGCGATCC GCCGCTCGCTGCTCGATGTCGAGCCGTTCTGGCATCGCGACGGAAACGGCGCGTCGGCCCCGGCCGTGGACCTGTCCGAG ACCGAGCAGGCCTACGAGATCACGGCCGAGTTGCCCGGCATGAACAAGCGGGACATCGCGGTCACGCTCGCGAGCGGCGG CCTGTCGATTCGCGGCGAGAAGCAGGAGGACAAGGAGGAGAAAAACAAGGACTACTACATGCGCGAACGGCGTTTCGGCA CCTTCGAGCGGTATTTTCCGATGCCCGAAGGCGTGGACCTCGACAAGATCGCCGCGTCCTTCGACAAGGGCGTGCTGAAG GTGACGCTGCCGAAGACTGCCGAGGCGTGCCGGGCCGCCAAGCGCATCGAGATCAAGGCCGGCTGA
Upstream 100 bases:
>100_bases CAGGCGCCGCGCAGGCGGCGGTACGCCGTTGACTTCAATCAATCCCCAGGGCATGGCGCGATCGAGAATGTCGACTCCAT TGCCCCTCAGGAGTGCAGCC
Downstream 100 bases:
>100_bases GGCGCGTGCCGAGCATGAGCCGGGCGCGAGGCCGGGCCGGGCGCCGCGCCGGACGCGGGCGGCCGCCGCTGCCGGGCGGC ACGGCGGGCTGCCTGCTGGC
Product: HSP20 family heat shock protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNESHHKPSNGVPADPVERGALTRSLRHPLETLRREIDRVFDDFDPAARLSAIRRSLLDVEPFWHRDGNGASAPAVDLSE TEQAYEITAELPGMNKRDIAVTLASGGLSIRGEKQEDKEEKNKDYYMRERRFGTFERYFPMPEGVDLDKIAASFDKGVLK VTLPKTAEACRAAKRIEIKAG
Sequences:
>Translated_181_residues MNESHHKPSNGVPADPVERGALTRSLRHPLETLRREIDRVFDDFDPAARLSAIRRSLLDVEPFWHRDGNGASAPAVDLSE TEQAYEITAELPGMNKRDIAVTLASGGLSIRGEKQEDKEEKNKDYYMRERRFGTFERYFPMPEGVDLDKIAASFDKGVLK VTLPKTAEACRAAKRIEIKAG >Mature_181_residues MNESHHKPSNGVPADPVERGALTRSLRHPLETLRREIDRVFDDFDPAARLSAIRRSLLDVEPFWHRDGNGASAPAVDLSE TEQAYEITAELPGMNKRDIAVTLASGGLSIRGEKQEDKEEKNKDYYMRERRFGTFERYFPMPEGVDLDKIAASFDKGVLK VTLPKTAEACRAAKRIEIKAG
Specific function: May stabilize cellular components during stress and spore formation [H]
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 20340; Mature: 20340
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESHHKPSNGVPADPVERGALTRSLRHPLETLRREIDRVFDDFDPAARLSAIRRSLLDV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC EPFWHRDGNGASAPAVDLSETEQAYEITAELPGMNKRDIAVTLASGGLSIRGEKQEDKEE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCHHHHHH KNKDYYMRERRFGTFERYFPMPEGVDLDKIAASFDKGVLKVTLPKTAEACRAAKRIEIKA HHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEECC G C >Mature Secondary Structure MNESHHKPSNGVPADPVERGALTRSLRHPLETLRREIDRVFDDFDPAARLSAIRRSLLDV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC EPFWHRDGNGASAPAVDLSETEQAYEITAELPGMNKRDIAVTLASGGLSIRGEKQEDKEE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCHHHHHH KNKDYYMRERRFGTFERYFPMPEGVDLDKIAASFDKGVLKVTLPKTAEACRAAKRIEIKA HHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHEEECC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226695; 8423161 [H]