Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025367
Identifier: 238025367
GI number: 238025367
Start: 2530729
End: 2531220
Strand: Reverse
Name: 238025367
Synonym: bglu_2g20430
Alternate gene names: NA
Gene position: 2531220-2530729 (Counterclockwise)
Preceding gene: 238025368
Following gene: 238025365
Centisome position: 89.53
GC content: 78.05
Gene sequence:
>492_bases ATGAGCCGGGCGCGAGGCCGGGCCGGGCGCCGCGCCGGACGCGGGCGGCCGCCGCTGCCGGGCGGCACGGCGGGCTGCCT GCTGGCGCTCGCGCTGTCCTGCTCGCCCGCGCGTGCCATGCCCGCCGCCGGCGCGCCCGCCGTGGCCGCGCAGGACGCGC CCCGCATCGTGCCCGGCGCGGTGGTCGCGGCGCAGGTCGAAACGCTGCGCGCCGTCGCCAGCCGCTACAACCTGCGGATC GCGGTCATCTCGGCACGCGGCGACTACCTGTCCGGGATCGATTTCGAGATTGCCTCGGGCCCGTGGCCGCTGTTCAGGGC GCGCACTGCCGGGGCCTTCCTGGCCGCGCACCTCAGCCCGGGACCCTACACGATCCGGGCGCGCCACGGCGCTATCGAGC AGGTTCGCGAAGTCCTGGTGCCGGCTCGCGGCGCCGTCGATCTGCGCATCGCCTGGCCGGACTCCGGCTCGCCCGGCGCG GCGCCCCGTTAG
Upstream 100 bases:
>100_bases TCGACAAGGGCGTGCTGAAGGTGACGCTGCCGAAGACTGCCGAGGCGTGCCGGGCCGCCAAGCGCATCGAGATCAAGGCC GGCTGAGGCGCGTGCCGAGC
Downstream 100 bases:
>100_bases GGCAGGGGCGCCTGGGATGGAGGTGGGCTCGCGCCTGCGATGGACGTCGCGAGGCCCGGTTTCAAGCGATCGACGATGGC CTGCCGCCGCCACGCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSRARGRAGRRAGRGRPPLPGGTAGCLLALALSCSPARAMPAAGAPAVAAQDAPRIVPGAVVAAQVETLRAVASRYNLRI AVISARGDYLSGIDFEIASGPWPLFRARTAGAFLAAHLSPGPYTIRARHGAIEQVREVLVPARGAVDLRIAWPDSGSPGA APR
Sequences:
>Translated_163_residues MSRARGRAGRRAGRGRPPLPGGTAGCLLALALSCSPARAMPAAGAPAVAAQDAPRIVPGAVVAAQVETLRAVASRYNLRI AVISARGDYLSGIDFEIASGPWPLFRARTAGAFLAAHLSPGPYTIRARHGAIEQVREVLVPARGAVDLRIAWPDSGSPGA APR >Mature_162_residues SRARGRAGRRAGRGRPPLPGGTAGCLLALALSCSPARAMPAAGAPAVAAQDAPRIVPGAVVAAQVETLRAVASRYNLRIA VISARGDYLSGIDFEIASGPWPLFRARTAGAFLAAHLSPGPYTIRARHGAIEQVREVLVPARGAVDLRIAWPDSGSPGAA PR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16746; Mature: 16614
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRARGRAGRRAGRGRPPLPGGTAGCLLALALSCSPARAMPAAGAPAVAAQDAPRIVPGA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH VVAAQVETLRAVASRYNLRIAVISARGDYLSGIDFEIASGPWPLFRARTAGAFLAAHLSP HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCEEEEEECCC GPYTIRARHGAIEQVREVLVPARGAVDLRIAWPDSGSPGAAPR CCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure SRARGRAGRRAGRGRPPLPGGTAGCLLALALSCSPARAMPAAGAPAVAAQDAPRIVPGA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH VVAAQVETLRAVASRYNLRIAVISARGDYLSGIDFEIASGPWPLFRARTAGAFLAAHLSP HHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCEEEEEECCC GPYTIRARHGAIEQVREVLVPARGAVDLRIAWPDSGSPGAAPR CCEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA