Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025369
Identifier: 238025369
GI number: 238025369
Start: 2532018
End: 2532668
Strand: Reverse
Name: 238025369
Synonym: bglu_2g20450
Alternate gene names: NA
Gene position: 2532668-2532018 (Counterclockwise)
Preceding gene: 238025370
Following gene: 238025368
Centisome position: 89.58
GC content: 71.27
Gene sequence:
>651_bases ATGAAGACCGACATCCAGCTGAAGAAGGACATCGAGAGCGAACTCGCGTGGGACCCGTCGATCGACGCGGCGCGTATCGG CGTCGCGGTCCATGACCGGATCGTCACGCTCAGCGGCGAGGTGCCGAGCTACCTGGGGAAGATCACGCTGCGCAAGGCGG TCGAGCGGATCGCAGAGGTCCGCGGCGTGGTGCTTGACCTCACGGTGCGGACTGCGGGCAGGGCGCAGCGCACGGACGCG GATATCGCGGCCGCGGCGCGAGCGGTGCTGGCGTGGGATGCGGCGCTCGGCGAGCAGGCGGTGCACGTCACGGTGGAGCG CGGCCGCGTGACGCTATCGGGCGACGTCGACGGGGCGCACCAGATGCAGGCCGCTGAGCGCGCCGTCGAACGCTTGAGCG GCGTCACCCACGTCAACAACGAGATCCGGGTGCGCCGGCATCCGGCGCAGAGCGATGTCGCGGCCAAGATCGCCGCGGCC ATGACCCGCCACGCGGCGGACGTGGCCGGCAAGGTCGCCGTCACGATCCAGGACGGCCGCGTGACGCTGACGGGGCGGGT GGATTCGCTGCGCGAGCTGCAACTCGCCCGCAACGCGGCATGGTCGGCCCCCGGCGTGCGCGAGGTGGTTGATCAGCTGA GCGTCGCCTGA
Upstream 100 bases:
>100_bases CCCGGCGCGCGGCCGATGCCCGCGAATGACCTGAGTCAATCGCGGGCCGGGCGGCATGCCTAAGGTTGTACCTGCCGCGC ACGAACAGGAGCCTAGGACC
Downstream 100 bases:
>100_bases GCCCGGCGGCATGCGGCCGATGCCGGGCGCACCCTCGGCGGGTCGGCTCTCGGGCGCGAGCCGCTCCTCGTGGCGGAGGG CGGCGGCGGCTTCGCGGGCA
Product: transport-associated protein
Products: NA
Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA
Sequences:
>Translated_216_residues MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA >Mature_216_residues MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23109; Mature: 23109
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEV CCCCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH RGVVLDLTVRTAGRAQRTDADIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAH CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCHH QMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAAMTRHAADVAGKVAVTIQDGR HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCE VTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEV CCCCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH RGVVLDLTVRTAGRAQRTDADIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAH CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCHH QMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAAMTRHAADVAGKVAVTIQDGR HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCE VTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA