Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025369

Identifier: 238025369

GI number: 238025369

Start: 2532018

End: 2532668

Strand: Reverse

Name: 238025369

Synonym: bglu_2g20450

Alternate gene names: NA

Gene position: 2532668-2532018 (Counterclockwise)

Preceding gene: 238025370

Following gene: 238025368

Centisome position: 89.58

GC content: 71.27

Gene sequence:

>651_bases
ATGAAGACCGACATCCAGCTGAAGAAGGACATCGAGAGCGAACTCGCGTGGGACCCGTCGATCGACGCGGCGCGTATCGG
CGTCGCGGTCCATGACCGGATCGTCACGCTCAGCGGCGAGGTGCCGAGCTACCTGGGGAAGATCACGCTGCGCAAGGCGG
TCGAGCGGATCGCAGAGGTCCGCGGCGTGGTGCTTGACCTCACGGTGCGGACTGCGGGCAGGGCGCAGCGCACGGACGCG
GATATCGCGGCCGCGGCGCGAGCGGTGCTGGCGTGGGATGCGGCGCTCGGCGAGCAGGCGGTGCACGTCACGGTGGAGCG
CGGCCGCGTGACGCTATCGGGCGACGTCGACGGGGCGCACCAGATGCAGGCCGCTGAGCGCGCCGTCGAACGCTTGAGCG
GCGTCACCCACGTCAACAACGAGATCCGGGTGCGCCGGCATCCGGCGCAGAGCGATGTCGCGGCCAAGATCGCCGCGGCC
ATGACCCGCCACGCGGCGGACGTGGCCGGCAAGGTCGCCGTCACGATCCAGGACGGCCGCGTGACGCTGACGGGGCGGGT
GGATTCGCTGCGCGAGCTGCAACTCGCCCGCAACGCGGCATGGTCGGCCCCCGGCGTGCGCGAGGTGGTTGATCAGCTGA
GCGTCGCCTGA

Upstream 100 bases:

>100_bases
CCCGGCGCGCGGCCGATGCCCGCGAATGACCTGAGTCAATCGCGGGCCGGGCGGCATGCCTAAGGTTGTACCTGCCGCGC
ACGAACAGGAGCCTAGGACC

Downstream 100 bases:

>100_bases
GCCCGGCGGCATGCGGCCGATGCCGGGCGCACCCTCGGCGGGTCGGCTCTCGGGCGCGAGCCGCTCCTCGTGGCGGAGGG
CGGCGGCGGCTTCGCGGGCA

Product: transport-associated protein

Products: NA

Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA
DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA
MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA

Sequences:

>Translated_216_residues
MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA
DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA
MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA
>Mature_216_residues
MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEVRGVVLDLTVRTAGRAQRTDA
DIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAHQMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAA
MTRHAADVAGKVAVTIQDGRVTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23109; Mature: 23109

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEV
CCCCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
RGVVLDLTVRTAGRAQRTDADIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAH
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCHH
QMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAAMTRHAADVAGKVAVTIQDGR
HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCE
VTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA
EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKTDIQLKKDIESELAWDPSIDAARIGVAVHDRIVTLSGEVPSYLGKITLRKAVERIAEV
CCCCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
RGVVLDLTVRTAGRAQRTDADIAAAARAVLAWDAALGEQAVHVTVERGRVTLSGDVDGAH
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCCHH
QMQAAERAVERLSGVTHVNNEIRVRRHPAQSDVAAKIAAAMTRHAADVAGKVAVTIQDGR
HHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCE
VTLTGRVDSLRELQLARNAAWSAPGVREVVDQLSVA
EEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA