Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025349
Identifier: 238025349
GI number: 238025349
Start: 2513697
End: 2514059
Strand: Reverse
Name: 238025349
Synonym: bglu_2g20250
Alternate gene names: NA
Gene position: 2514059-2513697 (Counterclockwise)
Preceding gene: 238025350
Following gene: 238025341
Centisome position: 88.92
GC content: 72.45
Gene sequence:
>363_bases ATGGGCATGCGCATGCAGATCGCCTATTTCGGTTTTGCCGGCTCCGCCCGGCTGGAGGCCGAGGCAGCCATCCAGTCGAG GCGGCTGGAGCGCTTCGGCGCGCGCTGGTCCGGCTGCTACCTCGCGATCGAATCATGTAGCCGGCACGCCGTCCACACCG GCTTCGACGTGCGGCTCGATCTGATCGGCCGCGATGGCCGGCTGCTGCCCTTGCCGCACGTGGCCGGACCGGACCCGGTG GCGGCACTGCGGTGCGCCTTCGACGGCGCCGTGCAGCGGCTGCGCGAAACCGAGGCCGGCCGGCCCGACGGACCGCCGCC GCCGGATGGCGGCGACAAGCCCGTCAGCGTTCCTGACCGGTGA
Upstream 100 bases:
>100_bases GATCGCGGCGCGCGCGCGGCCGGCAGTCGCGCGGCGCCGGCGAAGCGGGGCCGCGCGCCGGGACGGACCGGCAAGGGGCC TGGACGCGGGGGAGCGCGCG
Downstream 100 bases:
>100_bases ACACTTCGTGCTCGGCGCAGGGGCTCGAACGGTCGATGCACTGAGCCCGCCAGGTACCGGCCACGGGCGCCGCGCCCGGC TGCGGCCACCAGCGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGMRMQIAYFGFAGSARLEAEAAIQSRRLERFGARWSGCYLAIESCSRHAVHTGFDVRLDLIGRDGRLLPLPHVAGPDPV AALRCAFDGAVQRLRETEAGRPDGPPPPDGGDKPVSVPDR
Sequences:
>Translated_120_residues MGMRMQIAYFGFAGSARLEAEAAIQSRRLERFGARWSGCYLAIESCSRHAVHTGFDVRLDLIGRDGRLLPLPHVAGPDPV AALRCAFDGAVQRLRETEAGRPDGPPPPDGGDKPVSVPDR >Mature_119_residues GMRMQIAYFGFAGSARLEAEAAIQSRRLERFGARWSGCYLAIESCSRHAVHTGFDVRLDLIGRDGRLLPLPHVAGPDPVA ALRCAFDGAVQRLRETEAGRPDGPPPPDGGDKPVSVPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12983; Mature: 12852
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMRMQIAYFGFAGSARLEAEAAIQSRRLERFGARWSGCYLAIESCSRHAVHTGFDVRLD CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCEEEEE LIGRDGRLLPLPHVAGPDPVAALRCAFDGAVQRLRETEAGRPDGPPPPDGGDKPVSVPDR EECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GMRMQIAYFGFAGSARLEAEAAIQSRRLERFGARWSGCYLAIESCSRHAVHTGFDVRLD CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCEEEEE LIGRDGRLLPLPHVAGPDPVAALRCAFDGAVQRLRETEAGRPDGPPPPDGGDKPVSVPDR EECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA