Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is osmY [C]

Identifier: 238025350

GI number: 238025350

Start: 2514179

End: 2514829

Strand: Reverse

Name: osmY [C]

Synonym: bglu_2g20260

Alternate gene names: 238025350

Gene position: 2514829-2514179 (Counterclockwise)

Preceding gene: 238025351

Following gene: 238025349

Centisome position: 88.95

GC content: 70.05

Gene sequence:

>651_bases
GTGAAAAGCGACGAACAGTTGAAGCGCGACGTCGAGGAGGAACTGGCGGCGGATCCGGCGATTCATGGCAGCCTCTGGCG
CGTCAGGGTGGTCAACGCGGTCGTGGAGCTGTCGGGTCACCCCACCAGCTATGCGAGCAAGCTGGCGGCGGAGCGGGCGG
TGCAGCGCGTGTCGGGGGTGCGGGCCCTGGTGTCGGAGCTGGACGTGCGGCTGCCCGACGGCGAGCGGCGCGACGATCTC
GAACTCGCCCAGGCGGTGCGTTCGATCCTGCACTGGACCGTCGGCACCCACGGCGATGCGATTCACGCACAGGTCGAGCA
CGGTTGGGTCACGCTGACGGGCCGGGTCGATTGGGCCTACCAGAGCCATGTCGCCCTGCGCGCGATCTCGCAGATGCGCG
GCGTGCTGGGCGTGTCCGACCGGATCGAGATTCTCGGCGATGTCGGCGCGGACGAGATCGGCACGAACATCCGCCGCGCG
CTGGAGCGGCACGCACAGCGCGAGGCTCGGCATATCGAGGTGAGCGTGAAGGACGGCATGGTCACGCTGAGCGGCAAGGT
CGGCTCCCACGCCGAGCGCAGGGCCGCACGCGGTGCCGCCTGGTCCGCGCGCGGGGTGCGCGCGGTGGTCGATGAACTGA
CCGTCCGATGA

Upstream 100 bases:

>100_bases
CAGCGACTTCCTAGAGTGGCCCTGCGCGGGCGCTCGCCCACCCGCTTCGGAAAGCTGACCATTCATGCGGCGCTGATGCC
GCGCTATCGGGAGAGACGAG

Downstream 100 bases:

>100_bases
TGCCGGGGCGACCTGCGCGGATCGCGGCGCGCGCGCGGCCGGCAGTCGCGCGGCGCCGGCGAAGCGGGGCCGCGCGCCGG
GACGGACCGGCAAGGGGCCT

Product: OsmY domain-containing protein

Products: NA

Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL
ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA
LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR

Sequences:

>Translated_216_residues
MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL
ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA
LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR
>Mature_216_residues
MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL
ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA
LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23701; Mature: 23701

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RALVSELDVRLPDGERRDDLELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAY
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEHHH
QSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRALERHAQREARHIEVSVKDGM
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE
VTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR
EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGV
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RALVSELDVRLPDGERRDDLELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAY
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEHHH
QSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRALERHAQREARHIEVSVKDGM
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE
VTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR
EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA