Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is osmY [C]
Identifier: 238025350
GI number: 238025350
Start: 2514179
End: 2514829
Strand: Reverse
Name: osmY [C]
Synonym: bglu_2g20260
Alternate gene names: 238025350
Gene position: 2514829-2514179 (Counterclockwise)
Preceding gene: 238025351
Following gene: 238025349
Centisome position: 88.95
GC content: 70.05
Gene sequence:
>651_bases GTGAAAAGCGACGAACAGTTGAAGCGCGACGTCGAGGAGGAACTGGCGGCGGATCCGGCGATTCATGGCAGCCTCTGGCG CGTCAGGGTGGTCAACGCGGTCGTGGAGCTGTCGGGTCACCCCACCAGCTATGCGAGCAAGCTGGCGGCGGAGCGGGCGG TGCAGCGCGTGTCGGGGGTGCGGGCCCTGGTGTCGGAGCTGGACGTGCGGCTGCCCGACGGCGAGCGGCGCGACGATCTC GAACTCGCCCAGGCGGTGCGTTCGATCCTGCACTGGACCGTCGGCACCCACGGCGATGCGATTCACGCACAGGTCGAGCA CGGTTGGGTCACGCTGACGGGCCGGGTCGATTGGGCCTACCAGAGCCATGTCGCCCTGCGCGCGATCTCGCAGATGCGCG GCGTGCTGGGCGTGTCCGACCGGATCGAGATTCTCGGCGATGTCGGCGCGGACGAGATCGGCACGAACATCCGCCGCGCG CTGGAGCGGCACGCACAGCGCGAGGCTCGGCATATCGAGGTGAGCGTGAAGGACGGCATGGTCACGCTGAGCGGCAAGGT CGGCTCCCACGCCGAGCGCAGGGCCGCACGCGGTGCCGCCTGGTCCGCGCGCGGGGTGCGCGCGGTGGTCGATGAACTGA CCGTCCGATGA
Upstream 100 bases:
>100_bases CAGCGACTTCCTAGAGTGGCCCTGCGCGGGCGCTCGCCCACCCGCTTCGGAAAGCTGACCATTCATGCGGCGCTGATGCC GCGCTATCGGGAGAGACGAG
Downstream 100 bases:
>100_bases TGCCGGGGCGACCTGCGCGGATCGCGGCGCGCGCGCGGCCGGCAGTCGCGCGGCGCCGGCGAAGCGGGGCCGCGCGCCGG GACGGACCGGCAAGGGGCCT
Product: OsmY domain-containing protein
Products: NA
Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR
Sequences:
>Translated_216_residues MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR >Mature_216_residues MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGVRALVSELDVRLPDGERRDDL ELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAYQSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRA LERHAQREARHIEVSVKDGMVTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR
Specific function: Unknown
COG id: COG2823
COG function: function code R; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23701; Mature: 23701
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGV CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RALVSELDVRLPDGERRDDLELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAY HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEHHH QSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRALERHAQREARHIEVSVKDGM HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE VTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKSDEQLKRDVEEELAADPAIHGSLWRVRVVNAVVELSGHPTSYASKLAAERAVQRVSGV CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RALVSELDVRLPDGERRDDLELAQAVRSILHWTVGTHGDAIHAQVEHGWVTLTGRVDWAY HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEHHH QSHVALRAISQMRGVLGVSDRIEILGDVGADEIGTNIRRALERHAQREARHIEVSVKDGM HHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE VTLSGKVGSHAERRAARGAAWSARGVRAVVDELTVR EEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA