Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is aroH [H]
Identifier: 238025339
GI number: 238025339
Start: 2500635
End: 2501735
Strand: Reverse
Name: aroH [H]
Synonym: bglu_2g20130
Alternate gene names: 238025339
Gene position: 2501735-2500635 (Counterclockwise)
Preceding gene: 238025341
Following gene: 238025338
Centisome position: 88.48
GC content: 68.03
Gene sequence:
>1101_bases GTGGAGCAGCCTCATCTGAAAGGCTCGGCGCCGGTCATCGGGGCGGTGCAGCTGCGCGGCGAGTTGCATGCCGACGCCGC CGTTACCAGCGTGGTACGCGGTACCCGGCGCGCGCTCGCCGGCATCCTCGCGGGCAGGGACGATCGCCTCGCGCTGATCG TCGGGCCATGCTCGATTCACGACACTGTCGCCGCGCTGGAATTCGCGCGTCGGCTCGCGCCGTTGCGGGCGCGTTACGCC GATAGGCTCGAGATCGTGATGCGCACGTACTTCGAAAAGCCGCGCACCACGGTGGGCTGGAAGGGATTGATCAACGATCC GCTGCTCGACGGCAGCTATCGCGTCGACGACGGGCTGCGTCTTGCGCGCCGCCTGCTGCTCGACATCAACCTGCTGGGCA TGCCGGTCGCGACCGAGTTTCTCGATCCGCTCACGGTGCCTTACCTCGACGATCTGGTGTCCTGGGGCGCGATTGGCGCA CGCACGACCGAGTCGCAGATACACCGGCAGATCGCATCCGGTCTCGAGGCGCCGATCGGCTTCAAGAACGGTACCGACGG CAACGTGAAGATCGCGATCGATGCGGTTCGCACCGCGCGGGCGGCGCATCGCTATCTACGGCCGCGCGACGAAGGCGGCC TCGAGCTCGCGTCCACGCCGGGCAATCCGAATACGCACATCGTGCTGCGCGGAGGGCGCACGCCGAACTATGACGACCTC AGCGTGACGGCTGCCTGTGCGGCGCTGCGCGACGCGCAATTGCCGCCGCACCTCGTGATCGATGCGAGCCACGGCAACAG CGGCAAGCAGACCCGTGCGCAGATCGGCGTATGCGAGAACCTGGCAGGGCAGCTGCGCAACGGGCAGCGCGCGATTGCCG GCGTGATGATCGAGTCGTTCCTCGTCGAGGGACGCCAGGACATCGTACCCGGCGCCGCGCCGACCTTCGGGCAGAGCGTG ACCGACGCCTGTCTCGGTTGGGAGGACACGGCGGCGCTGATCGAGCTGTTTGCCGCCGCGATTGCGTCGCGGCGGCACTC CCGAGTCGGCTTTCCGCTACCCGGCGTTCCGGCCGGCGCCGTGCAAGCCATTTCTTACTGA
Upstream 100 bases:
>100_bases GGGCGGCGGCTGATATAAATGACAGTATCAAATCTGATTTAGGGAAGTTTTAATTGGCTCCCGTGAGTTTCGTATTGTCG GATCCAACTCGGAGAGTCAA
Downstream 100 bases:
>100_bases AAGGAGCTTTCTTGAACTCACCCATCGATATCGCACACGCGCTCGACTGGAAGGGGGACGGCGCGAGCCGGACACCGTTC GAGGCCTATACGAGCGATGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEQPHLKGSAPVIGAVQLRGELHADAAVTSVVRGTRRALAGILAGRDDRLALIVGPCSIHDTVAALEFARRLAPLRARYA DRLEIVMRTYFEKPRTTVGWKGLINDPLLDGSYRVDDGLRLARRLLLDINLLGMPVATEFLDPLTVPYLDDLVSWGAIGA RTTESQIHRQIASGLEAPIGFKNGTDGNVKIAIDAVRTARAAHRYLRPRDEGGLELASTPGNPNTHIVLRGGRTPNYDDL SVTAACAALRDAQLPPHLVIDASHGNSGKQTRAQIGVCENLAGQLRNGQRAIAGVMIESFLVEGRQDIVPGAAPTFGQSV TDACLGWEDTAALIELFAAAIASRRHSRVGFPLPGVPAGAVQAISY
Sequences:
>Translated_366_residues MEQPHLKGSAPVIGAVQLRGELHADAAVTSVVRGTRRALAGILAGRDDRLALIVGPCSIHDTVAALEFARRLAPLRARYA DRLEIVMRTYFEKPRTTVGWKGLINDPLLDGSYRVDDGLRLARRLLLDINLLGMPVATEFLDPLTVPYLDDLVSWGAIGA RTTESQIHRQIASGLEAPIGFKNGTDGNVKIAIDAVRTARAAHRYLRPRDEGGLELASTPGNPNTHIVLRGGRTPNYDDL SVTAACAALRDAQLPPHLVIDASHGNSGKQTRAQIGVCENLAGQLRNGQRAIAGVMIESFLVEGRQDIVPGAAPTFGQSV TDACLGWEDTAALIELFAAAIASRRHSRVGFPLPGVPAGAVQAISY >Mature_366_residues MEQPHLKGSAPVIGAVQLRGELHADAAVTSVVRGTRRALAGILAGRDDRLALIVGPCSIHDTVAALEFARRLAPLRARYA DRLEIVMRTYFEKPRTTVGWKGLINDPLLDGSYRVDDGLRLARRLLLDINLLGMPVATEFLDPLTVPYLDDLVSWGAIGA RTTESQIHRQIASGLEAPIGFKNGTDGNVKIAIDAVRTARAAHRYLRPRDEGGLELASTPGNPNTHIVLRGGRTPNYDDL SVTAACAALRDAQLPPHLVIDASHGNSGKQTRAQIGVCENLAGQLRNGQRAIAGVMIESFLVEGRQDIVPGAAPTFGQSV TDACLGWEDTAALIELFAAAIASRRHSRVGFPLPGVPAGAVQAISY
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787996, Length=317, Percent_Identity=59.3059936908517, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1786969, Length=330, Percent_Identity=53.9393939393939, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI1788953, Length=331, Percent_Identity=48.6404833836858, Blast_Score=327, Evalue=8e-91, Organism=Saccharomyces cerevisiae, GI6319726, Length=326, Percent_Identity=47.239263803681, Blast_Score=293, Evalue=4e-80, Organism=Saccharomyces cerevisiae, GI6320240, Length=355, Percent_Identity=43.0985915492958, Blast_Score=292, Evalue=7e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 39108; Mature: 39108
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQPHLKGSAPVIGAVQLRGELHADAAVTSVVRGTRRALAGILAGRDDRLALIVGPCSIH CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH DTVAALEFARRLAPLRARYADRLEIVMRTYFEKPRTTVGWKGLINDPLLDGSYRVDDGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHHH LARRLLLDINLLGMPVATEFLDPLTVPYLDDLVSWGAIGARTTESQIHRQIASGLEAPIG HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC FKNGTDGNVKIAIDAVRTARAAHRYLRPRDEGGLELASTPGNPNTHIVLRGGRTPNYDDL CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCH SVTAACAALRDAQLPPHLVIDASHGNSGKQTRAQIGVCENLAGQLRNGQRAIAGVMIESF HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVEGRQDIVPGAAPTFGQSVTDACLGWEDTAALIELFAAAIASRRHSRVGFPLPGVPAGA HHCCHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VQAISY HHHCCC >Mature Secondary Structure MEQPHLKGSAPVIGAVQLRGELHADAAVTSVVRGTRRALAGILAGRDDRLALIVGPCSIH CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH DTVAALEFARRLAPLRARYADRLEIVMRTYFEKPRTTVGWKGLINDPLLDGSYRVDDGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHHH LARRLLLDINLLGMPVATEFLDPLTVPYLDDLVSWGAIGARTTESQIHRQIASGLEAPIG HHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC FKNGTDGNVKIAIDAVRTARAAHRYLRPRDEGGLELASTPGNPNTHIVLRGGRTPNYDDL CCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCH SVTAACAALRDAQLPPHLVIDASHGNSGKQTRAQIGVCENLAGQLRNGQRAIAGVMIESF HHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LVEGRQDIVPGAAPTFGQSVTDACLGWEDTAALIELFAAAIASRRHSRVGFPLPGVPAGA HHCCHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH VQAISY HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]