Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025192
Identifier: 238025192
GI number: 238025192
Start: 2322020
End: 2322481
Strand: Reverse
Name: 238025192
Synonym: bglu_2g18630
Alternate gene names: NA
Gene position: 2322481-2322020 (Counterclockwise)
Preceding gene: 238025193
Following gene: 238025191
Centisome position: 82.14
GC content: 69.05
Gene sequence:
>462_bases ATGACTGAACCGATACTCGACGATGCGCTGTGGTCATTGATCCAGCCGCTGCTCCCGCCGCCCAAGCCGCGTCGGACCCG CTATCCGGGGCGCAAGCCGCTCGACGACCGGGCGGTGATGGCAGGCATCCTGGTCGTGCTCGAATCGGGCATTCCCTGGG GGCAACTGCCACAGGAGATGGGCTACGGCTCCGGCATGAGCTGCTGGCGCCGCTTGCGCGACTGGCAGCAGGCGGGCGTG TGGGAGCAGATCCACTCCGTGCTGATGGTGGCGCTGCCGTCGGCCGGCAAGATCGACTGGTCGCGCGTGGCGATCGAATC GCCGTCGCCGCGCACGCTCAAGGCCAATCCGGAACGCCTGCCCGTCGCACCGCGCATCCCGCACGAGCCGCAGCCGCGCA TGGTGCTGCATGCGCCGATGCTGCCGCAGCCGCAACTGCACGACGTGTCCGAGGTCAGCTGA
Upstream 100 bases:
>100_bases GCGGGCGATTCCGCTGGATGCCGTCCGCCCGGCGACCGCGTCACACGACGCGGGCCAGGCCGGCATTCGTGTCATCTGGC ATTTTGTAGACGAGGTAGTC
Downstream 100 bases:
>100_bases AGCCAGCCGCCCGACGACGGCGCCGGTAGTCCCGCGCGGCGTCACGACGGTTCTCGACACGTTTTTCACCCGGCCGATCC GGGCTCGCATGCTGTCGCAT
Product: Insertion element IS402
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTEPILDDALWSLIQPLLPPPKPRRTRYPGRKPLDDRAVMAGILVVLESGIPWGQLPQEMGYGSGMSCWRRLRDWQQAGV WEQIHSVLMVALPSAGKIDWSRVAIESPSPRTLKANPERLPVAPRIPHEPQPRMVLHAPMLPQPQLHDVSEVS
Sequences:
>Translated_153_residues MTEPILDDALWSLIQPLLPPPKPRRTRYPGRKPLDDRAVMAGILVVLESGIPWGQLPQEMGYGSGMSCWRRLRDWQQAGV WEQIHSVLMVALPSAGKIDWSRVAIESPSPRTLKANPERLPVAPRIPHEPQPRMVLHAPMLPQPQLHDVSEVS >Mature_152_residues TEPILDDALWSLIQPLLPPPKPRRTRYPGRKPLDDRAVMAGILVVLESGIPWGQLPQEMGYGSGMSCWRRLRDWQQAGVW EQIHSVLMVALPSAGKIDWSRVAIESPSPRTLKANPERLPVAPRIPHEPQPRMVLHAPMLPQPQLHDVSEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17222; Mature: 17091
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPILDDALWSLIQPLLPPPKPRRTRYPGRKPLDDRAVMAGILVVLESGIPWGQLPQEM CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GYGSGMSCWRRLRDWQQAGVWEQIHSVLMVALPSAGKIDWSRVAIESPSPRTLKANPERL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCC PVAPRIPHEPQPRMVLHAPMLPQPQLHDVSEVS CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TEPILDDALWSLIQPLLPPPKPRRTRYPGRKPLDDRAVMAGILVVLESGIPWGQLPQEM CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GYGSGMSCWRRLRDWQQAGVWEQIHSVLMVALPSAGKIDWSRVAIESPSPRTLKANPERL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCCCCC PVAPRIPHEPQPRMVLHAPMLPQPQLHDVSEVS CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]