Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is dhbF [H]
Identifier: 238025193
GI number: 238025193
Start: 2322783
End: 2323712
Strand: Reverse
Name: dhbF [H]
Synonym: bglu_2g18640
Alternate gene names: 238025193
Gene position: 2323712-2322783 (Counterclockwise)
Preceding gene: 238025196
Following gene: 238025192
Centisome position: 82.19
GC content: 74.09
Gene sequence:
>930_bases ATGACGATGCGTGCCGATGCCGCGTATCCGGTCGACGACCGGCTCCATCATCCTGGCCCGGCGCCGCTCGAGCCCGGCGC GCTGATCGCCGCGCTCGGCTACTGGCGCGACACGCTAGCCGGCCTGCCGGCCGCGCTCGCACTGCCGGCGGACCGGTGCC GCGAACGGCCCGCCGCACGCGTGGCCGAGCGCATCGACTTCGAGATCGATCCGGCCCGGCATGCCGCGCTACGGCGCCTG GCGGCAACGCACGGTGCAACGATGTTCGAGATCGTTCACGCCGCGCTCGCGATCGTGCTCGGCGGCATCGCGGCCCAGCA CGATCTGGCGATCGGCACGCCGGGGCGTGCCGGCGCCGCCGCGAACCGCGTGGTGCTGCGCACCGACCTGTCCGGCAATC CGTCCACCAGCGAACTGCTGCGGCGCGTGCGCACGGCCGATCGCGCCGCGCTCGCGTGCCGGCCGGTGCCGTTCGCGCCG CTCGCCGCGCTGCTCGCGCCCGAGTCCGGCGCCGTCCATCCCTTGTTCCAGGTGATGCTCGCGGTCGGCCATGTCGGCGA CGACCTGTCGTGGGCCGCGCAGGCCATCGCCGATGGGGTCGAGCTCGCGGTCGCGCTGCGCGACAGCTACGGCGCGCTGT CCGGCGCCATCGTCTACGCGGAGCAGTGGTACGACCGCGAAACCATCGAGGCGATTCGTGCCCGCCTCTGGCAGGTGCTC GACACCATCGCCGCCGATCCGTCGCGCCGCTTCGGCGACATGCCGTTGCTGATCCGCGACGATTGCGAGCGCCTGCGCGC CTGGATGCAGGCGCCCGGCATGCCGGCCCCGGCGCCCGCCTGCGGGGGGCCCGCTGACAGTGACATGGCCGTGCGTGCGT GCCGCCGCATGGCCAGGAAGGACATACCGGGCGAGCCGATCGCGGCCTGA
Upstream 100 bases:
>100_bases GTCCGGTGTCGCGCGCCCACCCGCGCCGCGGCCCGTCGCTGCCGTCGCCCGGGCGGACCACGGCCGGGCGCTTGCCCGGC ACGGCGGCGCGGCGGAGGGC
Downstream 100 bases:
>100_bases ACGGCCGGTGCGGGCCGCGCCGGCCTCGTCCGGCCAGGCCGCCGTACCGGGTGGGTACGGCGTGCCGATCGCTGCCGGGA TCGGCGCGTCGGGGCGTGTC
Product: non-ribosomal peptide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTMRADAAYPVDDRLHHPGPAPLEPGALIAALGYWRDTLAGLPAALALPADRCRERPAARVAERIDFEIDPARHAALRRL AATHGATMFEIVHAALAIVLGGIAAQHDLAIGTPGRAGAAANRVVLRTDLSGNPSTSELLRRVRTADRAALACRPVPFAP LAALLAPESGAVHPLFQVMLAVGHVGDDLSWAAQAIADGVELAVALRDSYGALSGAIVYAEQWYDRETIEAIRARLWQVL DTIAADPSRRFGDMPLLIRDDCERLRAWMQAPGMPAPAPACGGPADSDMAVRACRRMARKDIPGEPIAA
Sequences:
>Translated_309_residues MTMRADAAYPVDDRLHHPGPAPLEPGALIAALGYWRDTLAGLPAALALPADRCRERPAARVAERIDFEIDPARHAALRRL AATHGATMFEIVHAALAIVLGGIAAQHDLAIGTPGRAGAAANRVVLRTDLSGNPSTSELLRRVRTADRAALACRPVPFAP LAALLAPESGAVHPLFQVMLAVGHVGDDLSWAAQAIADGVELAVALRDSYGALSGAIVYAEQWYDRETIEAIRARLWQVL DTIAADPSRRFGDMPLLIRDDCERLRAWMQAPGMPAPAPACGGPADSDMAVRACRRMARKDIPGEPIAA >Mature_308_residues TMRADAAYPVDDRLHHPGPAPLEPGALIAALGYWRDTLAGLPAALALPADRCRERPAARVAERIDFEIDPARHAALRRLA ATHGATMFEIVHAALAIVLGGIAAQHDLAIGTPGRAGAAANRVVLRTDLSGNPSTSELLRRVRTADRAALACRPVPFAPL AALLAPESGAVHPLFQVMLAVGHVGDDLSWAAQAIADGVELAVALRDSYGALSGAIVYAEQWYDRETIEAIRARLWQVLD TIAADPSRRFGDMPLLIRDDCERLRAWMQAPGMPAPAPACGGPADSDMAVRACRRMARKDIPGEPIAA
Specific function: Specifically adenylates threonine and glycine, and loads them onto their corresponding peptidyl carrier domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: NA
Molecular weight: Translated: 32845; Mature: 32714
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRADAAYPVDDRLHHPGPAPLEPGALIAALGYWRDTLAGLPAALALPADRCRERPAAR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCHHHH VAERIDFEIDPARHAALRRLAATHGATMFEIVHAALAIVLGGIAAQHDLAIGTPGRAGAA HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH ANRVVLRTDLSGNPSTSELLRRVRTADRAALACRPVPFAPLAALLAPESGAVHPLFQVML HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHH AVGHVGDDLSWAAQAIADGVELAVALRDSYGALSGAIVYAEQWYDRETIEAIRARLWQVL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHCCHHHHHHHHHHHHHHH DTIAADPSRRFGDMPLLIRDDCERLRAWMQAPGMPAPAPACGGPADSDMAVRACRRMARK HHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DIPGEPIAA CCCCCCCCC >Mature Secondary Structure TMRADAAYPVDDRLHHPGPAPLEPGALIAALGYWRDTLAGLPAALALPADRCRERPAAR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCHHHH VAERIDFEIDPARHAALRRLAATHGATMFEIVHAALAIVLGGIAAQHDLAIGTPGRAGAA HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHH ANRVVLRTDLSGNPSTSELLRRVRTADRAALACRPVPFAPLAALLAPESGAVHPLFQVML HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHH AVGHVGDDLSWAAQAIADGVELAVALRDSYGALSGAIVYAEQWYDRETIEAIRARLWQVL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHCCHHHHHHHHHHHHHHH DTIAADPSRRFGDMPLLIRDDCERLRAWMQAPGMPAPAPACGGPADSDMAVRACRRMARK HHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DIPGEPIAA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11112781; 9384377; 10568751; 8550523 [H]