Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
---|---|
Accession | NC_012721 |
Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025161
Identifier: 238025161
GI number: 238025161
Start: 2285803
End: 2286204
Strand: Reverse
Name: 238025161
Synonym: bglu_2g18270
Alternate gene names: NA
Gene position: 2286204-2285803 (Counterclockwise)
Preceding gene: 238025172
Following gene: 238025159
Centisome position: 80.86
GC content: 68.41
Gene sequence:
>402_bases ATGAGCATCTTTGGCGATATCGTGAACAAGCTGTTCGGCAAGGCCAAACCGGACCAGCCGCCGCCCGCGGCCGAACCCGT CCCGGACCCGGCCGCCGCGCAGGACGTGGCGCCCGAGGCCGCGCCGGCCCCGGCGCCGCTGTCCGACGTCGACGTCGCGG CGGTGATGGACCAACTGGTGGCCGACAGCGGCCAGACGCTGAACTGGCGCGTGTCGATCGTCGACACCATGAAGGCGCTC GGCGTGGACAGCAGCCTCGAGCATCGCAAACGGCTCGCCGCGGAACTGCACTACGACGGCGACATGAACGACTCGGCGAG CATGAACGTCTGGCTGCACAAGACGGTAATGCAGGCGCTGGCCGCCAACGGCGGCAAGCTGCCGTCCGATCTGGCGAATT GA
Upstream 100 bases:
>100_bases CGCGGCGCCAAGCCGCGTAACATGGGGCGCGTCATGCATGGCGCGCCCGCTCGCGCGGGTGCCGTTTTCCTCCACCTCAC CCACCGATTGGAGCCCAGAC
Downstream 100 bases:
>100_bases GCGCCGGGCCGGCACTGCCGCAGGGCGGCCGCGCAGAGGCGTGATGCCGGGCCGCGCAGCGCGGGCGGCCGCGCCGCCTT GCACCGAACTGCCGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSIFGDIVNKLFGKAKPDQPPPAAEPVPDPAAAQDVAPEAAPAPAPLSDVDVAAVMDQLVADSGQTLNWRVSIVDTMKAL GVDSSLEHRKRLAAELHYDGDMNDSASMNVWLHKTVMQALAANGGKLPSDLAN
Sequences:
>Translated_133_residues MSIFGDIVNKLFGKAKPDQPPPAAEPVPDPAAAQDVAPEAAPAPAPLSDVDVAAVMDQLVADSGQTLNWRVSIVDTMKAL GVDSSLEHRKRLAAELHYDGDMNDSASMNVWLHKTVMQALAANGGKLPSDLAN >Mature_132_residues SIFGDIVNKLFGKAKPDQPPPAAEPVPDPAAAQDVAPEAAPAPAPLSDVDVAAVMDQLVADSGQTLNWRVSIVDTMKALG VDSSLEHRKRLAAELHYDGDMNDSASMNVWLHKTVMQALAANGGKLPSDLAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13968; Mature: 13837
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFGDIVNKLFGKAKPDQPPPAAEPVPDPAAAQDVAPEAAPAPAPLSDVDVAAVMDQLV CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH ADSGQTLNWRVSIVDTMKALGVDSSLEHRKRLAAELHYDGDMNDSASMNVWLHKTVMQAL HCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AANGGKLPSDLAN HHCCCCCCHHHCC >Mature Secondary Structure SIFGDIVNKLFGKAKPDQPPPAAEPVPDPAAAQDVAPEAAPAPAPLSDVDVAAVMDQLV CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH ADSGQTLNWRVSIVDTMKALGVDSSLEHRKRLAAELHYDGDMNDSASMNVWLHKTVMQAL HCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH AANGGKLPSDLAN HHCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA