Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025172
Identifier: 238025172
GI number: 238025172
Start: 2298842
End: 2299255
Strand: Reverse
Name: 238025172
Synonym: bglu_2g18430
Alternate gene names: NA
Gene position: 2299255-2298842 (Counterclockwise)
Preceding gene: 238025173
Following gene: 238025161
Centisome position: 81.32
GC content: 69.57
Gene sequence:
>414_bases ATGAGCGCAAACAAGGAAGTGATCACCCACCGCAACCCTGCCTCGCAGGCCGACCACGAGCGCGCGGAAGGCGCGGAGCA AGTCGAGCGCACCTTGCCGGCGGTCGACGTGATCGAGGACAGCCGCGGCGTCACGCTGTATGCCGACCTGCCCGGGGTGC CGCGCGACAAGCTCGACATACGGGTGGCCGACGGCAGCCTGAGCATCGAGGCCGAGGCGGTGATCCCGGTGCCTTCCGGG CTGCGGCTGCGGCACGGCGAAATCCGTCATCCGCGCTTCCTGCGCGTCTTCACGCTGAGCCAGGATCTCGATACCTCGCG CATCGATGCGCAGCTGCGCGACGGCGTCCTGACGCTGAGCATCCCACGCCGTGAGGAGGCGCAGCCGCGACGCATCGAGG TCCGCGCCGGCTGA
Upstream 100 bases:
>100_bases ACGGCTGCTTGCTGATCAGCGTCGGACGCTCCGAGGCGTCGCGGCCGCGGGCAGTGGCGGTGCAATGACCTTTCGACGAT TTTTGGAACTGGAGCCCATC
Downstream 100 bases:
>100_bases GCAAGGCGGCAGCGGCAAGCGAGTCCGGATGCCGGGCAGCTCGCGGGTCGCGCGATGGCCGCCGGCAGGCTCGTCGCCGG CGGCCGCGCCATCGAGAGCC
Product: heat shock protein Hsp20
Products: NA
Alternate protein names: HSP20 Family Protein; Heat Shock Protein; Small Heat Shock Protein; Hsp20 Family Heat-Shock Protein; HSP20 Family Molecular Chaperone; Molecular Chaperone; Hsp20-Like Molecular Chaperone; Small Heat Shock Protein Family Protein; Low Molecular Weight Heat Shock Protein; Heat Shock Protein SP; Small Heat-Shock; Heat Shock Family Protein; Heat Shock Chaperone; Hsp20/Alpha Crystallin Molecular Chaperone; Small Class I Heat Shock Protein; Alpha-Crystallin/Hsp20 Family ATP-Independent Chaperone
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSANKEVITHRNPASQADHERAEGAEQVERTLPAVDVIEDSRGVTLYADLPGVPRDKLDIRVADGSLSIEAEAVIPVPSG LRLRHGEIRHPRFLRVFTLSQDLDTSRIDAQLRDGVLTLSIPRREEAQPRRIEVRAG
Sequences:
>Translated_137_residues MSANKEVITHRNPASQADHERAEGAEQVERTLPAVDVIEDSRGVTLYADLPGVPRDKLDIRVADGSLSIEAEAVIPVPSG LRLRHGEIRHPRFLRVFTLSQDLDTSRIDAQLRDGVLTLSIPRREEAQPRRIEVRAG >Mature_136_residues SANKEVITHRNPASQADHERAEGAEQVERTLPAVDVIEDSRGVTLYADLPGVPRDKLDIRVADGSLSIEAEAVIPVPSGL RLRHGEIRHPRFLRVFTLSQDLDTSRIDAQLRDGVLTLSIPRREEAQPRRIEVRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15231; Mature: 15100
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANKEVITHRNPASQADHERAEGAEQVERTLPAVDVIEDSRGVTLYADLPGVPRDKLDI CCCCCCEEEECCCCCCCCCHHHCCHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEE RVADGSLSIEAEAVIPVPSGLRLRHGEIRHPRFLRVFTLSQDLDTSRIDAQLRDGVLTLS EEECCCEEEEEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEEE IPRREEAQPRRIEVRAG ECCCCCCCCCEEEEECC >Mature Secondary Structure SANKEVITHRNPASQADHERAEGAEQVERTLPAVDVIEDSRGVTLYADLPGVPRDKLDI CCCCCEEEECCCCCCCCCHHHCCHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEE RVADGSLSIEAEAVIPVPSGLRLRHGEIRHPRFLRVFTLSQDLDTSRIDAQLRDGVLTLS EEECCCEEEEEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCEEEEE IPRREEAQPRRIEVRAG ECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA