Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is proP [H]
Identifier: 238025157
GI number: 238025157
Start: 2279344
End: 2280690
Strand: Reverse
Name: proP [H]
Synonym: bglu_2g18230
Alternate gene names: 238025157
Gene position: 2280690-2279344 (Counterclockwise)
Preceding gene: 238025159
Following gene: 238025156
Centisome position: 80.67
GC content: 71.71
Gene sequence:
>1347_bases ATGGCGATCGGCAACGCAATGGAGTGGTTCGATTTCGGCGTCTACAGCTATATCGCCGTGACGCTCGGCGAAGTGTTCTT TCCGTCCACCAGCGGCCCGGTGCAGTTGATCGCCACTTTCGGCACGTTCGCGGCCGCGTTCCTCGTGCGGCCGATCGGCG GCCTGGTGTTCGGCCCGCTCGGCGACCGCATCGGCCGCCAGCGCGTGCTCGCGATGACGATGATCCTGATGGCGCTCGGC ACCTTCGCGATCGGCCTGATCCCCGGCTACGGCTCGATCGGCATCCTCGCGCCCTTGCTGCTGCTGGTCGCGCGGCTCGT GCAGGGCTTCTCGACGGGCGGCGAGTACGGCGGCGCGGCCACCTTCATCGCCGAGTTCGCGGCGGACCGGCATCGCGGCT TGATGGGCAGCTTCCTCGAATTCGGCACGCTGGCCGGCTACCTGCTCGGCGCGGGCACCGTCACGGCGCTCGCGGCGGCG CTCTCGCCCGCGCAGATGCTCGACTGGGGCTGGCGCGTGCCGTTCTTCATCGCCGGCCCGCTCGGGCTGATCGGCCTCTA CATCCGCACCCGCCTCGAGGAAACGCCGGCGTTCCGCAAGGAGGCCGAGCGCCGCGAGCGGTCCGGGCGCCCGCACGCGC GTCCGTCGTTGGCCGCGCTGCTGGCCGGGCAGTGGCGGCCAATGCTGGTCTGCGTCGGGCTGGTACTCATCTTCAACGTG ACCGACTACATGGTGCTCGCCTACCTGCCGAACTACCTGTCGGCCACGCTGCACATGGCGCAGACCCGCAGCCTGGCGAT GGTGTCGCTGGTGATGCTGGCGATGATGCCGCTCACGCTCGCGGCCGGCTGGCTGTCGGACCGGGTGGGCCGGCGCCCGG TGCTGCTGGCCGGCTGCCTCGGGCTGATCGTGCTGGCGGTGCCGGCGCTGCTGCTGATTCGCGGCGGCCAAGGCGTGCCG CTGTTCGCCGGCATGATGGTGCTGGGCGTGCTGCTCTGCTGCTTTTGCGGCGTGATGCCTTCGGCGTTGCCGGCGCTGTT TCCCACCTCGGTGCGCTATGGCGCGCTGGCGATCGGCTTCAACGTGTCGGTGTCGCTGTTCGGCGGCACCACGCCGCTCG TCACGGCATGGCTGGTCAGCGCCACCGGCAACCTGATGATGCCGGCCTACTACCTGATGGGGGCGGCGGCGCTCGGCGCG GTGGCGGTGCTGGCGGCGCGCGAGAGCGCGGGCCGGCCGCTGCCGGGCTCGGCGCCATGCGTGGCGACCCAGGCCGAGGC GCAGCGCCTGCGCCGTGACGGCGCGGGCCGGCTCGCCCAGGCCGGCTTCACCCCCGCCAGGAAGTAG
Upstream 100 bases:
>100_bases GCCCCGCTCGCCGGGCGCGCCTGAAGCGCGCGCGGCCGCCAGCGACCAGCACGAGGTGACGGTCGTCGATCGCGCGCTGC TGCGGCGCGCAGTGGGCGCG
Downstream 100 bases:
>100_bases CCGCCGCCATCGCCGGCAAGCCCCGCCGGCCGGACCGTTCCCGGTTCCGGCACCGGCCGGCTTTGCGCGGCGTGCGGAAC CGGTTGCGTGCGCAACGGCT
Product: general substrate transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAIGNAMEWFDFGVYSYIAVTLGEVFFPSTSGPVQLIATFGTFAAAFLVRPIGGLVFGPLGDRIGRQRVLAMTMILMALG TFAIGLIPGYGSIGILAPLLLLVARLVQGFSTGGEYGGAATFIAEFAADRHRGLMGSFLEFGTLAGYLLGAGTVTALAAA LSPAQMLDWGWRVPFFIAGPLGLIGLYIRTRLEETPAFRKEAERRERSGRPHARPSLAALLAGQWRPMLVCVGLVLIFNV TDYMVLAYLPNYLSATLHMAQTRSLAMVSLVMLAMMPLTLAAGWLSDRVGRRPVLLAGCLGLIVLAVPALLLIRGGQGVP LFAGMMVLGVLLCCFCGVMPSALPALFPTSVRYGALAIGFNVSVSLFGGTTPLVTAWLVSATGNLMMPAYYLMGAAALGA VAVLAARESAGRPLPGSAPCVATQAEAQRLRRDGAGRLAQAGFTPARK
Sequences:
>Translated_448_residues MAIGNAMEWFDFGVYSYIAVTLGEVFFPSTSGPVQLIATFGTFAAAFLVRPIGGLVFGPLGDRIGRQRVLAMTMILMALG TFAIGLIPGYGSIGILAPLLLLVARLVQGFSTGGEYGGAATFIAEFAADRHRGLMGSFLEFGTLAGYLLGAGTVTALAAA LSPAQMLDWGWRVPFFIAGPLGLIGLYIRTRLEETPAFRKEAERRERSGRPHARPSLAALLAGQWRPMLVCVGLVLIFNV TDYMVLAYLPNYLSATLHMAQTRSLAMVSLVMLAMMPLTLAAGWLSDRVGRRPVLLAGCLGLIVLAVPALLLIRGGQGVP LFAGMMVLGVLLCCFCGVMPSALPALFPTSVRYGALAIGFNVSVSLFGGTTPLVTAWLVSATGNLMMPAYYLMGAAALGA VAVLAARESAGRPLPGSAPCVATQAEAQRLRRDGAGRLAQAGFTPARK >Mature_447_residues AIGNAMEWFDFGVYSYIAVTLGEVFFPSTSGPVQLIATFGTFAAAFLVRPIGGLVFGPLGDRIGRQRVLAMTMILMALGT FAIGLIPGYGSIGILAPLLLLVARLVQGFSTGGEYGGAATFIAEFAADRHRGLMGSFLEFGTLAGYLLGAGTVTALAAAL SPAQMLDWGWRVPFFIAGPLGLIGLYIRTRLEETPAFRKEAERRERSGRPHARPSLAALLAGQWRPMLVCVGLVLIFNVT DYMVLAYLPNYLSATLHMAQTRSLAMVSLVMLAMMPLTLAAGWLSDRVGRRPVLLAGCLGLIVLAVPALLLIRGGQGVPL FAGMMVLGVLLCCFCGVMPSALPALFPTSVRYGALAIGFNVSVSLFGGTTPLVTAWLVSATGNLMMPAYYLMGAAALGAV AVLAARESAGRPLPGSAPCVATQAEAQRLRRDGAGRLAQAGFTPARK
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=443, Percent_Identity=48.9841986455982, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1788292, Length=414, Percent_Identity=32.3671497584541, Blast_Score=191, Evalue=7e-50, Organism=Escherichia coli, GI1789941, Length=418, Percent_Identity=35.1674641148325, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI1788942, Length=377, Percent_Identity=32.6259946949602, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI87082231, Length=224, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082404, Length=317, Percent_Identity=24.6056782334385, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 47080; Mature: 46949
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2 ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGNAMEWFDFGVYSYIAVTLGEVFFPSTSGPVQLIATFGTFAAAFLVRPIGGLVFGPL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCH GDRIGRQRVLAMTMILMALGTFAIGLIPGYGSIGILAPLLLLVARLVQGFSTGGEYGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH TFIAEFAADRHRGLMGSFLEFGTLAGYLLGAGTVTALAAALSPAQMLDWGWRVPFFIAGP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECH LGLIGLYIRTRLEETPAFRKEAERRERSGRPHARPSLAALLAGQWRPMLVCVGLVLIFNV HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TDYMVLAYLPNYLSATLHMAQTRSLAMVSLVMLAMMPLTLAAGWLSDRVGRRPVLLAGCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GLIVLAVPALLLIRGGQGVPLFAGMMVLGVLLCCFCGVMPSALPALFPTSVRYGALAIGF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC NVSVSLFGGTTPLVTAWLVSATGNLMMPAYYLMGAAALGAVAVLAARESAGRPLPGSAPC EEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VATQAEAQRLRRDGAGRLAQAGFTPARK EECHHHHHHHHHCCCCHHHHCCCCCCCC >Mature Secondary Structure AIGNAMEWFDFGVYSYIAVTLGEVFFPSTSGPVQLIATFGTFAAAFLVRPIGGLVFGPL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCH GDRIGRQRVLAMTMILMALGTFAIGLIPGYGSIGILAPLLLLVARLVQGFSTGGEYGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH TFIAEFAADRHRGLMGSFLEFGTLAGYLLGAGTVTALAAALSPAQMLDWGWRVPFFIAGP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECH LGLIGLYIRTRLEETPAFRKEAERRERSGRPHARPSLAALLAGQWRPMLVCVGLVLIFNV HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TDYMVLAYLPNYLSATLHMAQTRSLAMVSLVMLAMMPLTLAAGWLSDRVGRRPVLLAGCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GLIVLAVPALLLIRGGQGVPLFAGMMVLGVLLCCFCGVMPSALPALFPTSVRYGALAIGF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC NVSVSLFGGTTPLVTAWLVSATGNLMMPAYYLMGAAALGAVAVLAARESAGRPLPGSAPC EEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VATQAEAQRLRRDGAGRLAQAGFTPARK EECHHHHHHHHHCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]