Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025124
Identifier: 238025124
GI number: 238025124
Start: 2228049
End: 2228534
Strand: Reverse
Name: 238025124
Synonym: bglu_2g17850
Alternate gene names: NA
Gene position: 2228534-2228049 (Counterclockwise)
Preceding gene: 238025125
Following gene: 238025123
Centisome position: 78.82
GC content: 68.52
Gene sequence:
>486_bases ATGAAGACCGCCACGTTCATCCGCGGCGCCGGGCTGTCGCTCGCTGCCGCCAGCGCGCTGCTGACCGGCTGCGCGGCCCC GAGCACCCCGCAGCTCTATCAATGGGACGGCTACCAGCGCAGCGTCTACGACTACTTCACGGCGGAGAAGTCGCCGCAGG AGCAGATCGACGTGCTCGAGAAGGCGCTGCAGAAGATCCGCGCGCAGGGCCATCGGCCGCCGCCGGGTTTCGAGGCGCAA CTGGGCATGCTCTATGCCACGGTCGGCAACGACGAGCAGGCGATGCAGGCCTTCCAGGCCGAGAAGGACTCATTCCCGGA ATCCGCGCCATACATGGATTTCCTGATGAAGAAGAAGGCCGACGCCAAGGACGCCAAGCCGGGGCTCAAACCGGCCGACC AGCCCGTGACGGCTCCCGCCGCCGCCCAGCCTGCCGCCGCTTCGGCAGCCCGCCCCGACACCACTGCGCCGACCGCGAAT CACTGA
Upstream 100 bases:
>100_bases AGCGCCTCGTCGCGCAGGTCGACGCCGGGGCTCTCGGCGCCGCCAAGTGAGCCGTACATCAATCGTCATCCCTCGTTTCA CTCTCGACCACACGACCACG
Downstream 100 bases:
>100_bases CCGGAGGTCCTCATGTTGCAACGCATTTCGATCAAACTACTGTCGGCCGTCGCGCTGCTTGCCATGCTGGCTGCTTGCGC GGGCCCCGTTCAGCGCCTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKTATFIRGAGLSLAAASALLTGCAAPSTPQLYQWDGYQRSVYDYFTAEKSPQEQIDVLEKALQKIRAQGHRPPPGFEAQ LGMLYATVGNDEQAMQAFQAEKDSFPESAPYMDFLMKKKADAKDAKPGLKPADQPVTAPAAAQPAAASAARPDTTAPTAN H
Sequences:
>Translated_161_residues MKTATFIRGAGLSLAAASALLTGCAAPSTPQLYQWDGYQRSVYDYFTAEKSPQEQIDVLEKALQKIRAQGHRPPPGFEAQ LGMLYATVGNDEQAMQAFQAEKDSFPESAPYMDFLMKKKADAKDAKPGLKPADQPVTAPAAAQPAAASAARPDTTAPTAN H >Mature_161_residues MKTATFIRGAGLSLAAASALLTGCAAPSTPQLYQWDGYQRSVYDYFTAEKSPQEQIDVLEKALQKIRAQGHRPPPGFEAQ LGMLYATVGNDEQAMQAFQAEKDSFPESAPYMDFLMKKKADAKDAKPGLKPADQPVTAPAAAQPAAASAARPDTTAPTAN H
Specific function: Unknown
COG id: COG4259
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17172; Mature: 17172
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTATFIRGAGLSLAAASALLTGCAAPSTPQLYQWDGYQRSVYDYFTAEKSPQEQIDVLE CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHH KALQKIRAQGHRPPPGFEAQLGMLYATVGNDEQAMQAFQAEKDSFPESAPYMDFLMKKKA HHHHHHHHCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DAKDAKPGLKPADQPVTAPAAAQPAAASAARPDTTAPTANH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTATFIRGAGLSLAAASALLTGCAAPSTPQLYQWDGYQRSVYDYFTAEKSPQEQIDVLE CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHHHHH KALQKIRAQGHRPPPGFEAQLGMLYATVGNDEQAMQAFQAEKDSFPESAPYMDFLMKKKA HHHHHHHHCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCC DAKDAKPGLKPADQPVTAPAAAQPAAASAARPDTTAPTANH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA