Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025125

Identifier: 238025125

GI number: 238025125

Start: 2228585

End: 2229271

Strand: Reverse

Name: 238025125

Synonym: bglu_2g17860

Alternate gene names: NA

Gene position: 2229271-2228585 (Counterclockwise)

Preceding gene: 238025126

Following gene: 238025124

Centisome position: 78.85

GC content: 66.96

Gene sequence:

>687_bases
ATGAACCAATCTGCTGGTTCTCGCACCTGCGTGGCGGCAATGTCCGCCGCGCTCGCGCTCGGCCTGGGCGCCTGCGCAAC
CGAATCCTCGCGCAGCCTGCCGGTGGCGCCGACCCCCAGTGCCCAGGTGCCGTTCGCCGGCAAGCCGGTGACGATCTCGG
TCGGCAAGTTCGACAACCGCTCGAGCTACATGCGCGGCATCTTCTCCGACGGCATCGACCGCCTCGGCGGCCAGGCCAAG
ACGATCCTGATCACGCACCTGCAGCAGAGCCGCCGCTTCAGCGTGCTCGACCGCGACAACCTCGATGAGATCCGCCAGGA
ATCGGCCTTTCTGAAACAGCAGCAGGCGGTGAAGGGCGCGCGCTACGTGGTGACCGGCGACGTCACCGAGTTCGGCCGCA
AGGAGGTCGGCGATCACGAACTGTTCGGCATCCTCGGTAGCAGCAAGCAGCAGGTGGCCTATGCCAAGGTCAACCTCAAT
ATCGTCGATGCCGCCACCTCCGAGGTCGTGCTGTCCAGCCAGGGTGCCGGCGAGTTCAGCCTGTCAAGCCGCCAGGTGAT
CGGTTTCGGCGGCACCGCCAGCTACGATTCGACGCTCAACGGCAAGGTGCTCGACCTGGCGATCCAGGAGGCCGTCGAGC
GCCTCGTCGCGCAGGTCGACGCCGGGGCTCTCGGCGCCGCCAAGTGA

Upstream 100 bases:

>100_bases
CCCATGGACGTGCCGGACGAGGCATCTGACAGGATCGGCTGATCCGGAACGCATGTTTTAAAAATCGAAGCTTTTACCTT
TTACTAATGAGGTTCCCTCT

Downstream 100 bases:

>100_bases
GCCGTACATCAATCGTCATCCCTCGTTTCACTCTCGACCACACGACCACGATGAAGACCGCCACGTTCATCCGCGGCGCC
GGGCTGTCGCTCGCTGCCGC

Product: CsgG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK
TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN
IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK

Sequences:

>Translated_228_residues
MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK
TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN
IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK
>Mature_228_residues
MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNRSSYMRGIFSDGIDRLGGQAK
TILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGARYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLN
IVDAATSEVVLSSQGAGEFSLSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK

Specific function: Unknown

COG id: COG1462

COG function: function code M; Uncharacterized protein involved in formation of curli polymers

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005534
- InterPro:   IPR007195 [H]

Pfam domain/function: PF03783 CsgG [H]

EC number: NA

Molecular weight: Translated: 23927; Mature: 23927

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH
SSYMRGIFSDGIDRLGGQAKTILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGA
HHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLNIVDAATSEVVLSSQGAGEFS
EEEEECCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCEE
LSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNQSAGSRTCVAAMSAALALGLGACATESSRSLPVAPTPSAQVPFAGKPVTISVGKFDNR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCH
SSYMRGIFSDGIDRLGGQAKTILITHLQQSRRFSVLDRDNLDEIRQESAFLKQQQAVKGA
HHHHHHHHHHHHHHHCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RYVVTGDVTEFGRKEVGDHELFGILGSSKQQVAYAKVNLNIVDAATSEVVLSSQGAGEFS
EEEEECCHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEEEEECCCCEEEEECCCCCCEE
LSSRQVIGFGGTASYDSTLNGKVLDLAIQEAVERLVAQVDAGALGAAK
CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]