Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025121
Identifier: 238025121
GI number: 238025121
Start: 2225431
End: 2226048
Strand: Reverse
Name: 238025121
Synonym: bglu_2g17800
Alternate gene names: NA
Gene position: 2226048-2225431 (Counterclockwise)
Preceding gene: 238025122
Following gene: 238025120
Centisome position: 78.73
GC content: 70.71
Gene sequence:
>618_bases ATGAATTCGCATGGCTTGCACCAGACGCACCAGACGCGCGCGGCCGAGGCGCAGCGCGCCGCGCCGCCGCTGGCCGGGTT CGTTGCCGCGTTTTCGCGTCTGATCGACACGCAGCCCGACGAGGCACGCGTGCTGCGCGACGGCGGCGCGCTGCTGGCCG ATCTGGTCGCGCGTGACGACTGGCTGCCCGAATCGTTCGCACGGCCCGATCCCGAGCGCTACCAGCAGTTCCTGCTGCAT CGCGATCCCGACGCGCGATTCTCGATCGTCAGCTTCGTCTGGGGGCCGGGGCAGGTCACGCCGATCCACGATCACACCGT CTGGGGGCTGATCGGCATGCTGCGCGGCGCCGAATATTCGCAGCCCTACGCGTTCGACGGCGCCGGCTTGCCGGTGCCGG CCGGCGCGCCGCTGCGGCTTGCTCCGGGCCAGGTCGAGGCGGTGTCGCCGACGCTCGGCGACGTTCACCGCGTCGGCAAC GTCTACCACGACCGCGTGTCGATCAGCATCCACGTCTATGGCGCCGACATCGGCGCGATCGAGCGCTCGGTCTATCGCGA GGACGGCACGCGCAAGCCGTTCGTCTCCGGCTATACGCTGCCGGCCGGCGTCGCGTGA
Upstream 100 bases:
>100_bases ATCATCACCGCGAAGGCATCGATATCAGCGATTTTCATGCTAGTTTTGCAGCTAACAGATTTGATGTTACGAACCTGCAT CGTATTCGAAGGGGCTCCCG
Downstream 100 bases:
>100_bases GCGCGCTGCCGGTCGCGCCCGGCGGCCCGCCCGGGCCGTCCGCCGCATGTTCAGCACGGGTGCCGCGCTGCCTGAAGCGC GCGATCGTAGGGCTTGCCGC
Product: Cysteine dioxygenase type I
Products: NA
Alternate protein names: Cysteine Dioxygenase Type I Protein; Cysteine Dioxygenase; Cytoplasmic Protein; Double-Stranded Beta Helix Superfamily-Like Protein; Metal-Dependent Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNSHGLHQTHQTRAAEAQRAAPPLAGFVAAFSRLIDTQPDEARVLRDGGALLADLVARDDWLPESFARPDPERYQQFLLH RDPDARFSIVSFVWGPGQVTPIHDHTVWGLIGMLRGAEYSQPYAFDGAGLPVPAGAPLRLAPGQVEAVSPTLGDVHRVGN VYHDRVSISIHVYGADIGAIERSVYREDGTRKPFVSGYTLPAGVA
Sequences:
>Translated_205_residues MNSHGLHQTHQTRAAEAQRAAPPLAGFVAAFSRLIDTQPDEARVLRDGGALLADLVARDDWLPESFARPDPERYQQFLLH RDPDARFSIVSFVWGPGQVTPIHDHTVWGLIGMLRGAEYSQPYAFDGAGLPVPAGAPLRLAPGQVEAVSPTLGDVHRVGN VYHDRVSISIHVYGADIGAIERSVYREDGTRKPFVSGYTLPAGVA >Mature_205_residues MNSHGLHQTHQTRAAEAQRAAPPLAGFVAAFSRLIDTQPDEARVLRDGGALLADLVARDDWLPESFARPDPERYQQFLLH RDPDARFSIVSFVWGPGQVTPIHDHTVWGLIGMLRGAEYSQPYAFDGAGLPVPAGAPLRLAPGQVEAVSPTLGDVHRVGN VYHDRVSISIHVYGADIGAIERSVYREDGTRKPFVSGYTLPAGVA
Specific function: Unknown
COG id: COG5553
COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22266; Mature: 22266
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSHGLHQTHQTRAAEAQRAAPPLAGFVAAFSRLIDTQPDEARVLRDGGALLADLVARDD CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHHHHHCC WLPESFARPDPERYQQFLLHRDPDARFSIVSFVWGPGQVTPIHDHTVWGLIGMLRGAEYS CCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC QPYAFDGAGLPVPAGAPLRLAPGQVEAVSPTLGDVHRVGNVYHDRVSISIHVYGADIGAI CCEEECCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHCCCEECEEEEEEEEEECCHHHH ERSVYREDGTRKPFVSGYTLPAGVA HHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSHGLHQTHQTRAAEAQRAAPPLAGFVAAFSRLIDTQPDEARVLRDGGALLADLVARDD CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHHHHHCC WLPESFARPDPERYQQFLLHRDPDARFSIVSFVWGPGQVTPIHDHTVWGLIGMLRGAEYS CCCHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC QPYAFDGAGLPVPAGAPLRLAPGQVEAVSPTLGDVHRVGNVYHDRVSISIHVYGADIGAI CCEEECCCCCCCCCCCCEEECCCCCEECCCCHHHHHHHCCCEECEEEEEEEEEECCHHHH ERSVYREDGTRKPFVSGYTLPAGVA HHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA