Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025122
Identifier: 238025122
GI number: 238025122
Start: 2226818
End: 2227264
Strand: Reverse
Name: 238025122
Synonym: bglu_2g17830
Alternate gene names: NA
Gene position: 2227264-2226818 (Counterclockwise)
Preceding gene: 238025123
Following gene: 238025121
Centisome position: 78.78
GC content: 66.67
Gene sequence:
>447_bases ATGGGTAAGCCAATCCTTGATGACCAACGGCGGGCACGGATCGCACCACTGCTACCTCCGCCAAAGCCGCACCGCTTCGG GTATCCCGGCCGCAAGCCAGTAGCGGACCGTGCGGCTTTGGCAGGCATCCTATGGGCCTTGATGACGGGCATTCGCTGGC GCGACTTACCGTCCGCAATGGGATGCGACTCGGGCCTGAGTGGTTGGCGCCGGCGGCGCGATTGGCAGCAAGCCGGCGTG CGGGATCGACTGCATGCAGTGCTGCCGGCGAAGCTGCGAGCCGCCGAGAAGCTCGACTTCTCCCGCGCGGTCGTCGACGC ATCGTCGATTCGTGCGGTTGGGGCGGTTGGGGCGGGCGAAAAACCGGCCCGCACCCTACCGATCGAGCGCGACCCGGTTC GAAGCGCCACATCGCCACCGTCTCCAACCGAATGCCGATCGCGGTAA
Upstream 100 bases:
>100_bases TACGGCACCGACTAAGTGAGGTTTGCAAAAAGAGCCCGGCGGCTGTTGGCTGTTTCAGCATCCTGTTAAGCTCGGCCGTC GTGACAGACGGGCCAAGGAG
Downstream 100 bases:
>100_bases TCCTGAGCGGCGCCAATCGTAACGACGTCACCCAACTGGTTGCGCTGATCGAGGCGGTCGGCCTCTGAGCCATCCAGGCC AGAGAGCGACCGGCGGGCGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGKPILDDQRRARIAPLLPPPKPHRFGYPGRKPVADRAALAGILWALMTGIRWRDLPSAMGCDSGLSGWRRRRDWQQAGV RDRLHAVLPAKLRAAEKLDFSRAVVDASSIRAVGAVGAGEKPARTLPIERDPVRSATSPPSPTECRSR
Sequences:
>Translated_148_residues MGKPILDDQRRARIAPLLPPPKPHRFGYPGRKPVADRAALAGILWALMTGIRWRDLPSAMGCDSGLSGWRRRRDWQQAGV RDRLHAVLPAKLRAAEKLDFSRAVVDASSIRAVGAVGAGEKPARTLPIERDPVRSATSPPSPTECRSR >Mature_147_residues GKPILDDQRRARIAPLLPPPKPHRFGYPGRKPVADRAALAGILWALMTGIRWRDLPSAMGCDSGLSGWRRRRDWQQAGVR DRLHAVLPAKLRAAEKLDFSRAVVDASSIRAVGAVGAGEKPARTLPIERDPVRSATSPPSPTECRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16230; Mature: 16099
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKPILDDQRRARIAPLLPPPKPHRFGYPGRKPVADRAALAGILWALMTGIRWRDLPSAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH GCDSGLSGWRRRRDWQQAGVRDRLHAVLPAKLRAAEKLDFSRAVVDASSIRAVGAVGAGE CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPARTLPIERDPVRSATSPPSPTECRSR CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKPILDDQRRARIAPLLPPPKPHRFGYPGRKPVADRAALAGILWALMTGIRWRDLPSAM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH GCDSGLSGWRRRRDWQQAGVRDRLHAVLPAKLRAAEKLDFSRAVVDASSIRAVGAVGAGE CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPARTLPIERDPVRSATSPPSPTECRSR CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]