Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
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Accession | NC_012721 |
Length | 2,827,333 |
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The map label for this gene is 238025120
Identifier: 238025120
GI number: 238025120
Start: 2223624
End: 2225384
Strand: Reverse
Name: 238025120
Synonym: bglu_2g17790
Alternate gene names: NA
Gene position: 2225384-2223624 (Counterclockwise)
Preceding gene: 238025121
Following gene: 238025119
Centisome position: 78.71
GC content: 73.08
Gene sequence:
>1761_bases ATGTTCAGCACGGGTGCCGCGCTGCCTGAAGCGCGCGATCGTAGGGCTTGCCGCGGCACGCCGCCCGGCCTGGCCTTCCC TTTTCTTTCCCTGCCGATGAACGCCGTGTCCGATTCCGCCACCTTCTCCGCTCGTTCCGCCGCCGCCGTGTCCGATGCGG CGTTTCCCCGCCTGTCCGTCGCCGAGGTGCGCGCGGCGCTGCTCGCGCGCGAGGAGATCGCGCTCGTCGACGTGCGCGAG GAGGCGCCCTATGCGGCCGGCCATCCGCTGTGGGCCGCGAACCTGCCGCTGTCGACGCTCGAGCTGGAGGCCTGGACGCG CATCCCGCGCCGCGATACCGCGATCGCGCTGTACGGCGAATACGGCGACGAGGATCTCGCGCCGCGCGCGGCGTCCGTGC TCGCCGGTCTCGGCTACACGCGCGTGCACCTGCTCGACGGCGGTCTCGCGGCATGGAGCCGCGCGGGCGGCGAGCTGTTC ATCGACGTCAACGTGCCGAGCAAGGCGTTCGGCGAATACGTGGAAGCGAAGCGCCACACGCCGTCGCTGTCGGCGCAGGA GGTGCAGGCGCTGATCGAATCGAGGGCCGACGTGGTGATCGTCGATGCGCGCCGCTTCGATGAATACCAGACCATGAGCA TTCCAACCGCGACCAGCGTGCCCGGCGCCGAACTCGTGCTGCGCGTGCGCGAGCTCGCGCCCGATCCGGCCACGCGCGTG ATCGTCAACTGCGCGGGGCGCACGCGCAGCATCATCGGCACGCAGTCGCTCGTGAACGCGGGGCTGCCGAATCCGGTGGC CGCGCTGCGCAACGGCACGATCGGCTGGACGCTGGCCGGGCAGGCGCTCGAGCATGGCGCCACGCGGCGCTTTCCCGAGG CGGTGGCCGATGCGCATCGCGCCGCCGCGCGAGACGGCGCGCGCGCGGTGGCCGCCAGGGCGGGCGTCAAGCGCGTTGCG CCGGCCGAGGTGGACGCGCTCGGCGAGGGCGGGCGCCGCACCGTCTACCGGTTCGACGTGCGCACGCCCGGCGAATATGC GGCCGGCCATCTGCCCGGCTTCACCAGCGCGCCGGGTGGCCAGCTCGTGCAGGAAACCGATCATCACGCGCCGGTGCGCG GCGCGCGCATCGTATTGGCCGACGACGACGGCGTGCGTGCCGACATGAGCGCCTCGTGGCTCGCCCAGATGGGCTGGGAC GTCTACGTAGTCGAGCCGGCGCAGGCCGCCTCGGGCGGCGAGGCCGGCATGCCGCCGGCGCGCGCGCCCGAGGCGGCACC GGTGGCGCGCGTCACGCCGGCCACGCTCGCGGCGTGGCTCGATGCCGCGGACGGCGACGTGCCGGCCGTGATCGACGTGA GCGCTGGCGCGAACTACGTGAAGCGGCACATACCCGGTGCGTGGTATGTGATCCGCGCGCGGCTGCGCGAGGCGCTGGCC GCGATTCCGGCCGCGCGGCGCTACGTGCTGACCTGCGGCACCTCGCAGCTGGCCGCGTTCGCGGCGGCCGACCTGCGCGC GCTGCTGCCGGCCGAGGTGGGCGTATTCGTGCTGGACGGCGGCACGCAGGCCTGGATCGACGCGGGCCTGCCGCTCGAGC AGGGCGAGACGCGCCTCGCTTCGCAACGTGACGACCGCTACCGGCGTCCCTACGAAGGCACGCAGAACGCGGCGGCGGCG ATGCAGGCGTATCTCGATTGGGAGTTCGGCCTGGTCGCGCAACTCGGCCGCGACGGCACGCATCATTTTCACGTGATCTG A
Upstream 100 bases:
>100_bases GGCACGCGCAAGCCGTTCGTCTCCGGCTATACGCTGCCGGCCGGCGTCGCGTGAGCGCGCTGCCGGTCGCGCCCGGCGGC CCGCCCGGGCCGTCCGCCGC
Downstream 100 bases:
>100_bases GCGAGTTCGGCGGGCCGGCGCGAACGGCGCGCAGCTCGCCGCCTGCGTTTGCTCACGATAACTGCCCGCTCGCCAAGCAG TCCGAACCATGCACCGAGCC
Product: Rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Transferase; Sulfurtransferase; Rhodanese Domain Protein/Cystathionine Beta-Lyase; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Proteine; Transferase/Cystathione Beta-Lyase; Rhodanese-Like Domain-Containing; Rhodanese-Like Sulfur Transferase; Thiosulfate Sulfurtransferase Rhodanese-Like; Rhodanese-Like Protein Sulfurtransferase; Cystathionine Beta-Lyase
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MFSTGAALPEARDRRACRGTPPGLAFPFLSLPMNAVSDSATFSARSAAAVSDAAFPRLSVAEVRAALLAREEIALVDVRE EAPYAAGHPLWAANLPLSTLELEAWTRIPRRDTAIALYGEYGDEDLAPRAASVLAGLGYTRVHLLDGGLAAWSRAGGELF IDVNVPSKAFGEYVEAKRHTPSLSAQEVQALIESRADVVIVDARRFDEYQTMSIPTATSVPGAELVLRVRELAPDPATRV IVNCAGRTRSIIGTQSLVNAGLPNPVAALRNGTIGWTLAGQALEHGATRRFPEAVADAHRAAARDGARAVAARAGVKRVA PAEVDALGEGGRRTVYRFDVRTPGEYAAGHLPGFTSAPGGQLVQETDHHAPVRGARIVLADDDGVRADMSASWLAQMGWD VYVVEPAQAASGGEAGMPPARAPEAAPVARVTPATLAAWLDAADGDVPAVIDVSAGANYVKRHIPGAWYVIRARLREALA AIPAARRYVLTCGTSQLAAFAAADLRALLPAEVGVFVLDGGTQAWIDAGLPLEQGETRLASQRDDRYRRPYEGTQNAAAA MQAYLDWEFGLVAQLGRDGTHHFHVI
Sequences:
>Translated_586_residues MFSTGAALPEARDRRACRGTPPGLAFPFLSLPMNAVSDSATFSARSAAAVSDAAFPRLSVAEVRAALLAREEIALVDVRE EAPYAAGHPLWAANLPLSTLELEAWTRIPRRDTAIALYGEYGDEDLAPRAASVLAGLGYTRVHLLDGGLAAWSRAGGELF IDVNVPSKAFGEYVEAKRHTPSLSAQEVQALIESRADVVIVDARRFDEYQTMSIPTATSVPGAELVLRVRELAPDPATRV IVNCAGRTRSIIGTQSLVNAGLPNPVAALRNGTIGWTLAGQALEHGATRRFPEAVADAHRAAARDGARAVAARAGVKRVA PAEVDALGEGGRRTVYRFDVRTPGEYAAGHLPGFTSAPGGQLVQETDHHAPVRGARIVLADDDGVRADMSASWLAQMGWD VYVVEPAQAASGGEAGMPPARAPEAAPVARVTPATLAAWLDAADGDVPAVIDVSAGANYVKRHIPGAWYVIRARLREALA AIPAARRYVLTCGTSQLAAFAAADLRALLPAEVGVFVLDGGTQAWIDAGLPLEQGETRLASQRDDRYRRPYEGTQNAAAA MQAYLDWEFGLVAQLGRDGTHHFHVI >Mature_586_residues MFSTGAALPEARDRRACRGTPPGLAFPFLSLPMNAVSDSATFSARSAAAVSDAAFPRLSVAEVRAALLAREEIALVDVRE EAPYAAGHPLWAANLPLSTLELEAWTRIPRRDTAIALYGEYGDEDLAPRAASVLAGLGYTRVHLLDGGLAAWSRAGGELF IDVNVPSKAFGEYVEAKRHTPSLSAQEVQALIESRADVVIVDARRFDEYQTMSIPTATSVPGAELVLRVRELAPDPATRV IVNCAGRTRSIIGTQSLVNAGLPNPVAALRNGTIGWTLAGQALEHGATRRFPEAVADAHRAAARDGARAVAARAGVKRVA PAEVDALGEGGRRTVYRFDVRTPGEYAAGHLPGFTSAPGGQLVQETDHHAPVRGARIVLADDDGVRADMSASWLAQMGWD VYVVEPAQAASGGEAGMPPARAPEAAPVARVTPATLAAWLDAADGDVPAVIDVSAGANYVKRHIPGAWYVIRARLREALA AIPAARRYVLTCGTSQLAAFAAADLRALLPAEVGVFVLDGGTQAWIDAGLPLEQGETRLASQRDDRYRRPYEGTQNAAAA MQAYLDWEFGLVAQLGRDGTHHFHVI
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62060; Mature: 62060
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSTGAALPEARDRRACRGTPPGLAFPFLSLPMNAVSDSATFSARSAAAVSDAAFPRLSV CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCHH AEVRAALLAREEIALVDVREEAPYAAGHPLWAANLPLSTLELEAWTRIPRRDTAIALYGE HHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEEEC YGDEDLAPRAASVLAGLGYTRVHLLDGGLAAWSRAGGELFIDVNVPSKAFGEYVEAKRHT CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCC PSLSAQEVQALIESRADVVIVDARRFDEYQTMSIPTATSVPGAELVLRVRELAPDPATRV CCCCHHHHHHHHHCCCCEEEEECHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEE IVNCAGRTRSIIGTQSLVNAGLPNPVAALRNGTIGWTLAGQALEHGATRRFPEAVADAHR EEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECHHHHCCHHHCCHHHHHHHHH AAARDGARAVAARAGVKRVAPAEVDALGEGGRRTVYRFDVRTPGEYAAGHLPGFTSAPGG HHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC QLVQETDHHAPVRGARIVLADDDGVRADMSASWLAQMGWDVYVVEPAQAASGGEAGMPPA CHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCC RAPEAAPVARVTPATLAAWLDAADGDVPAVIDVSAGANYVKRHIPGAWYVIRARLREALA CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH AIPAARRYVLTCGTSQLAAFAAADLRALLPAEVGVFVLDGGTQAWIDAGLPLEQGETRLA HHHHHCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCHHHH SQRDDRYRRPYEGTQNAAAAMQAYLDWEFGLVAQLGRDGTHHFHVI HCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEC >Mature Secondary Structure MFSTGAALPEARDRRACRGTPPGLAFPFLSLPMNAVSDSATFSARSAAAVSDAAFPRLSV CCCCCCCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCHH AEVRAALLAREEIALVDVREEAPYAAGHPLWAANLPLSTLELEAWTRIPRRDTAIALYGE HHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEEEC YGDEDLAPRAASVLAGLGYTRVHLLDGGLAAWSRAGGELFIDVNVPSKAFGEYVEAKRHT CCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCC PSLSAQEVQALIESRADVVIVDARRFDEYQTMSIPTATSVPGAELVLRVRELAPDPATRV CCCCHHHHHHHHHCCCCEEEEECHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEE IVNCAGRTRSIIGTQSLVNAGLPNPVAALRNGTIGWTLAGQALEHGATRRFPEAVADAHR EEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECHHHHCCHHHCCHHHHHHHHH AAARDGARAVAARAGVKRVAPAEVDALGEGGRRTVYRFDVRTPGEYAAGHLPGFTSAPGG HHHHCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC QLVQETDHHAPVRGARIVLADDDGVRADMSASWLAQMGWDVYVVEPAQAASGGEAGMPPA CHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCC RAPEAAPVARVTPATLAAWLDAADGDVPAVIDVSAGANYVKRHIPGAWYVIRARLREALA CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHH AIPAARRYVLTCGTSQLAAFAAADLRALLPAEVGVFVLDGGTQAWIDAGLPLEQGETRLA HHHHHCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCHHHH SQRDDRYRRPYEGTQNAAAAMQAYLDWEFGLVAQLGRDGTHHFHVI HCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA