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The map label for this gene is ymdC [H]

Identifier: 238025048

GI number: 238025048

Start: 2139447

End: 2141078

Strand: Direct

Name: ymdC [H]

Synonym: bglu_2g17050

Alternate gene names: 238025048

Gene position: 2139447-2141078 (Clockwise)

Preceding gene: 238025033

Following gene: 238025052

Centisome position: 75.67

GC content: 70.65

Gene sequence:

>1632_bases
GTGCCGGCCATCCCCGTCCGTCGCGAGCCGCGCGTCCGCCGTCCGGCGCACCCGGCCCGCCGCTTCGCCGCAGCCGGCCT
GGCCGCGCTCTGGCTCGCCGGCTGCGCCACGCATCCGCCCGCCACCACGCTGCCGCGCTCGGTCACGCATGCGCTGCCGC
CGGACACGCCCACGCCGCTGCGCGAGGCGCTCGCCGCGCCCGAGCGCGCCCATCCGGGGCAGTCGGGCTTTCGCGTGCTG
TCGGTGGGCACCGATGCGCTGCAGATGCGCATCGCGCTGGCGCGCGCGGCCACCAAGACGCTCGACATGCAGTACTACAT
CGCCACCGAGGACACCACCGGCAAGCTGCTGCTGGCCGCGGCGCTCTACGCGGCCGATCGCGGCGTGCGGGTGCGGATGC
TGGTGGACGACCTGAACTTCAAGGACATCGGACAGGTGATGGCATCGCTGAACGCGCATCCCAACATCGAGATCCGCGTG
TTCAATCCGTTCGGGGCGACCCAGCGCGGCGTGTTGGCGCGCACTGCCGATTTCGTCTCGAAGATCGACCGCTTCACGCG
GCGCATGCACAACAAGGCGATGATCGCCGACAACCAGCTCGCGATCGTCGGCGGCCGCAACCTCGGCGACGAGTATTTCA
GCGCCAGCCCGACGCTGCAGTTCCGCGATCTCGACGTGCTCGCGGCCGGCCCCGTCACGGCCGACATCTCGCGCAGCTTC
GACACCTACTGGGCGAGCGCGAGCGCCTATCCGCTGCGCGCGCTCAATCATCAGCATTTCGATCCGCAGGATCTCGACCG
CACGCGCGAAGCGCTGCGCGAGCACTGGCGCGAGAACGCCCGCCCCTACGACGCGAAGCCGCTGAACGCCACGCCGCTCG
CCGACCAGATCGCGCGCGAGCAGCTCGGGCTGGTGTGGGCCGACGCGACGTTCGCGGTCGATTCGCCGGACAAGATCACG
ATGGCGCGCGGCACCTACCAGAGCCCGCCGATGCAGCAGCTGGCGAGGCTGACCCAGCAAGCGCGCCGCGAATTCCTGCT
GATCTCGCCGTACTTCGTGCCGCACCAAGCCGGCGTCGAGGCGCTCGGCCGGCTCGTGGCGCGCGGCGTGCGGGTGGCGG
TGCTGACCAATTCGCTCTCGGCCACCGACGCGGTAGCCGTGCAGGCCGGTTATGCGCCCTACCGCGTGCCGCTGCTCGAA
CGCGGCGTGGAGCTCTACGAGTTCCGCGCCGAGCAGCCGCAGGGCTCGACCGTGCGGATGTTCGGCTCGCAGTCGCGCTC
GAGCCTGCATGCGAAAGCCTACGTGGTGGACCGCAGCACGCTCGTGATCGGCTCGCTCAATCTCGATCCGCGCTCGGCCT
ACCTCAACACCGAACTCGCGCTCGTGATCCGCAGCCCGAAGCTGGCGGGCGAGGTCGCCACGCTGTTCGACCAGGTTACG
GCGCCGACCGAAAGCTACCGCGTGACGCTCGCCGATCCGTCGCCGTCGCCGAACGGCTGGCACTCGGCGCTCGTCTGGAC
CGACGTGGAACACGGCCAACAGCGCAGCTACAGCGTCGATCCGCACGCGGGGCTGCTGCGCAACGTGCTGACGGGCCTGT
TCCGGATGCTGCCCGTGGACGGCCAGCTGTGA

Upstream 100 bases:

>100_bases
GCCGCCGGCGGAGGGCGCCCGTAGAATCGTGGCGCACATCGCGCCCGGCACTCCCGCCCGCCGGCGCGCCACTCGCCTTG
CTTCCCAAGGAGTCCGCAGC

Downstream 100 bases:

>100_bases
GGCGCCGGCGCGCGCCTCGCGGCGACGGCGACGGCGGCGGTCGGCCGCGCCAGCCCGCCTGAGCACGAACCGGGCGCGGC
CGGCGCACGCGCGACGGCCA

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MPAIPVRREPRVRRPAHPARRFAAAGLAALWLAGCATHPPATTLPRSVTHALPPDTPTPLREALAAPERAHPGQSGFRVL
SVGTDALQMRIALARAATKTLDMQYYIATEDTTGKLLLAAALYAADRGVRVRMLVDDLNFKDIGQVMASLNAHPNIEIRV
FNPFGATQRGVLARTADFVSKIDRFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTADISRSF
DTYWASASAYPLRALNHQHFDPQDLDRTREALREHWRENARPYDAKPLNATPLADQIAREQLGLVWADATFAVDSPDKIT
MARGTYQSPPMQQLARLTQQARREFLLISPYFVPHQAGVEALGRLVARGVRVAVLTNSLSATDAVAVQAGYAPYRVPLLE
RGVELYEFRAEQPQGSTVRMFGSQSRSSLHAKAYVVDRSTLVIGSLNLDPRSAYLNTELALVIRSPKLAGEVATLFDQVT
APTESYRVTLADPSPSPNGWHSALVWTDVEHGQQRSYSVDPHAGLLRNVLTGLFRMLPVDGQL

Sequences:

>Translated_543_residues
MPAIPVRREPRVRRPAHPARRFAAAGLAALWLAGCATHPPATTLPRSVTHALPPDTPTPLREALAAPERAHPGQSGFRVL
SVGTDALQMRIALARAATKTLDMQYYIATEDTTGKLLLAAALYAADRGVRVRMLVDDLNFKDIGQVMASLNAHPNIEIRV
FNPFGATQRGVLARTADFVSKIDRFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTADISRSF
DTYWASASAYPLRALNHQHFDPQDLDRTREALREHWRENARPYDAKPLNATPLADQIAREQLGLVWADATFAVDSPDKIT
MARGTYQSPPMQQLARLTQQARREFLLISPYFVPHQAGVEALGRLVARGVRVAVLTNSLSATDAVAVQAGYAPYRVPLLE
RGVELYEFRAEQPQGSTVRMFGSQSRSSLHAKAYVVDRSTLVIGSLNLDPRSAYLNTELALVIRSPKLAGEVATLFDQVT
APTESYRVTLADPSPSPNGWHSALVWTDVEHGQQRSYSVDPHAGLLRNVLTGLFRMLPVDGQL
>Mature_542_residues
PAIPVRREPRVRRPAHPARRFAAAGLAALWLAGCATHPPATTLPRSVTHALPPDTPTPLREALAAPERAHPGQSGFRVLS
VGTDALQMRIALARAATKTLDMQYYIATEDTTGKLLLAAALYAADRGVRVRMLVDDLNFKDIGQVMASLNAHPNIEIRVF
NPFGATQRGVLARTADFVSKIDRFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTADISRSFD
TYWASASAYPLRALNHQHFDPQDLDRTREALREHWRENARPYDAKPLNATPLADQIAREQLGLVWADATFAVDSPDKITM
ARGTYQSPPMQQLARLTQQARREFLLISPYFVPHQAGVEALGRLVARGVRVAVLTNSLSATDAVAVQAGYAPYRVPLLER
GVELYEFRAEQPQGSTVRMFGSQSRSSLHAKAYVVDRSTLVIGSLNLDPRSAYLNTELALVIRSPKLAGEVATLFDQVTA
PTESYRVTLADPSPSPNGWHSALVWTDVEHGQQRSYSVDPHAGLLRNVLTGLFRMLPVDGQL

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PLD phosphodiesterase domains [H]

Homologues:

Organism=Escherichia coli, GI87081826, Length=477, Percent_Identity=37.5262054507338, Blast_Score=278, Evalue=9e-76,
Organism=Escherichia coli, GI1787007, Length=367, Percent_Identity=25.0681198910082, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59682; Mature: 59550

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIPVRREPRVRRPAHPARRFAAAGLAALWLAGCATHPPATTLPRSVTHALPPDTPTPL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHH
REALAAPERAHPGQSGFRVLSVGTDALQMRIALARAATKTLDMQYYIATEDTTGKLLLAA
HHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHH
ALYAADRGVRVRMLVDDLNFKDIGQVMASLNAHPNIEIRVFNPFGATQRGVLARTADFVS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
KIDRFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTADISRSF
HHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHCH
DTYWASASAYPLRALNHQHFDPQDLDRTREALREHWRENARPYDAKPLNATPLADQIARE
HHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
QLGLVWADATFAVDSPDKITMARGTYQSPPMQQLARLTQQARREFLLISPYFVPHQAGVE
HHCEEEECCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCHHHHH
ALGRLVARGVRVAVLTNSLSATDAVAVQAGYAPYRVPLLERGVELYEFRAEQPQGSTVRM
HHHHHHHCCEEEEEEECCCCCCCCEEEECCCCCEECHHHHCCCHHHHHHCCCCCCCEEEE
FGSQSRSSLHAKAYVVDRSTLVIGSLNLDPRSAYLNTELALVIRSPKLAGEVATLFDQVT
ECCCCCCCCEEEEEEEECCEEEEEECCCCCCHHEECCEEEEEEECCCHHHHHHHHHHHHC
APTESYRVTLADPSPSPNGWHSALVWTDVEHGQQRSYSVDPHAGLLRNVLTGLFRMLPVD
CCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GQL
CCC
>Mature Secondary Structure 
PAIPVRREPRVRRPAHPARRFAAAGLAALWLAGCATHPPATTLPRSVTHALPPDTPTPL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHH
REALAAPERAHPGQSGFRVLSVGTDALQMRIALARAATKTLDMQYYIATEDTTGKLLLAA
HHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHH
ALYAADRGVRVRMLVDDLNFKDIGQVMASLNAHPNIEIRVFNPFGATQRGVLARTADFVS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
KIDRFTRRMHNKAMIADNQLAIVGGRNLGDEYFSASPTLQFRDLDVLAAGPVTADISRSF
HHHHHHHHHCCCEEEECCCEEEEECCCCCHHHHCCCCCEEEECCEEEECCCCCHHHHHCH
DTYWASASAYPLRALNHQHFDPQDLDRTREALREHWRENARPYDAKPLNATPLADQIARE
HHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
QLGLVWADATFAVDSPDKITMARGTYQSPPMQQLARLTQQARREFLLISPYFVPHQAGVE
HHCEEEECCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCHHHHH
ALGRLVARGVRVAVLTNSLSATDAVAVQAGYAPYRVPLLERGVELYEFRAEQPQGSTVRM
HHHHHHHCCEEEEEEECCCCCCCCEEEECCCCCEECHHHHCCCHHHHHHCCCCCCCEEEE
FGSQSRSSLHAKAYVVDRSTLVIGSLNLDPRSAYLNTELALVIRSPKLAGEVATLFDQVT
ECCCCCCCCEEEEEEEECCEEEEEECCCCCCHHEECCEEEEEEECCCHHHHHHHHHHHHC
APTESYRVTLADPSPSPNGWHSALVWTDVEHGQQRSYSVDPHAGLLRNVLTGLFRMLPVD
CCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
GQL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]