Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025052

Identifier: 238025052

GI number: 238025052

Start: 2144133

End: 2144504

Strand: Direct

Name: 238025052

Synonym: bglu_2g17085

Alternate gene names: NA

Gene position: 2144133-2144504 (Clockwise)

Preceding gene: 238025048

Following gene: 238025059

Centisome position: 75.84

GC content: 56.45

Gene sequence:

>372_bases
ATGCCGGACGAGATCATGTCTTACCCGAAGAACGTATTCACCAACGACGGCCAATCCGACGTCGGCGGATTTGCCAAAAA
GCTGGCATTGGTGGCGCAAGCCATCAGGGCAGCCGGGACCATCACCGTCTACTACGGTTTCCATGGCGACCATGACGGCA
ATTTTTCGCACCCGTTCACGCGCGAAGAATTGGACCAATCGCTGCACATTGCAAGCGCATTTCCCAATGCCATCATGGTG
CAGGTCAGCGGCCCCACCGACCGCAAGATCGAATACGCCAAGCACAATGAGGTCGGGCAGGCGCTGTTCACCTGGTGCGA
CAGCGACACCTACATCAAGGACAACAAGTTGCTGCCGGACATCATCTCTTGA

Upstream 100 bases:

>100_bases
CACGACCGTTGTTTCCAGGGACCAACGAAGCGATTGGCGTGCATTGACGGGCAAGGCCGGCCAGGCAATAACGCTTTCCA
CCCAAACCAAGGAATCGATC

Downstream 100 bases:

>100_bases
GCGGCACGGCTGCCGCCGTGCCAATAAAAAAGCCGCCCCGAGGGGCGGCTTTTTCTCGACCGCCTCGCCCATCAGCCCGG
GCGAGGCGGGTCCGCGCTCG

Product: Expressed protein GR12

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMV
QVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS

Sequences:

>Translated_123_residues
MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMV
QVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS
>Mature_122_residues
PDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMVQ
VSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13622; Mature: 13491

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFT
CCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC
REELDQSLHIASAFPNAIMVQVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPD
HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHCCHHHHHHHHHCCCCCEECCCCCCCH
IIS
HCC
>Mature Secondary Structure 
PDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFT
CCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC
REELDQSLHIASAFPNAIMVQVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPD
HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHCCHHHHHHHHHCCCCCEECCCCCCCH
IIS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA