| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025052
Identifier: 238025052
GI number: 238025052
Start: 2144133
End: 2144504
Strand: Direct
Name: 238025052
Synonym: bglu_2g17085
Alternate gene names: NA
Gene position: 2144133-2144504 (Clockwise)
Preceding gene: 238025048
Following gene: 238025059
Centisome position: 75.84
GC content: 56.45
Gene sequence:
>372_bases ATGCCGGACGAGATCATGTCTTACCCGAAGAACGTATTCACCAACGACGGCCAATCCGACGTCGGCGGATTTGCCAAAAA GCTGGCATTGGTGGCGCAAGCCATCAGGGCAGCCGGGACCATCACCGTCTACTACGGTTTCCATGGCGACCATGACGGCA ATTTTTCGCACCCGTTCACGCGCGAAGAATTGGACCAATCGCTGCACATTGCAAGCGCATTTCCCAATGCCATCATGGTG CAGGTCAGCGGCCCCACCGACCGCAAGATCGAATACGCCAAGCACAATGAGGTCGGGCAGGCGCTGTTCACCTGGTGCGA CAGCGACACCTACATCAAGGACAACAAGTTGCTGCCGGACATCATCTCTTGA
Upstream 100 bases:
>100_bases CACGACCGTTGTTTCCAGGGACCAACGAAGCGATTGGCGTGCATTGACGGGCAAGGCCGGCCAGGCAATAACGCTTTCCA CCCAAACCAAGGAATCGATC
Downstream 100 bases:
>100_bases GCGGCACGGCTGCCGCCGTGCCAATAAAAAAGCCGCCCCGAGGGGCGGCTTTTTCTCGACCGCCTCGCCCATCAGCCCGG GCGAGGCGGGTCCGCGCTCG
Product: Expressed protein GR12
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMV QVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS
Sequences:
>Translated_123_residues MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMV QVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS >Mature_122_residues PDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFTREELDQSLHIASAFPNAIMVQ VSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPDIIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13622; Mature: 13491
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFT CCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC REELDQSLHIASAFPNAIMVQVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPD HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHCCHHHHHHHHHCCCCCEECCCCCCCH IIS HCC >Mature Secondary Structure PDEIMSYPKNVFTNDGQSDVGGFAKKLALVAQAIRAAGTITVYYGFHGDHDGNFSHPFT CCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC REELDQSLHIASAFPNAIMVQVSGPTDRKIEYAKHNEVGQALFTWCDSDTYIKDNKLLPD HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEHHHCCHHHHHHHHHCCCCCEECCCCCCCH IIS HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA