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The map label for this gene is nahR [H]

Identifier: 238025033

GI number: 238025033

Start: 2118124

End: 2119083

Strand: Direct

Name: nahR [H]

Synonym: bglu_2g16900

Alternate gene names: 238025033

Gene position: 2118124-2119083 (Clockwise)

Preceding gene: 238025027

Following gene: 238025048

Centisome position: 74.92

GC content: 67.5

Gene sequence:

>960_bases
ATGCAACTGGACGACATCGATCTCAACCTGCTGGTGCTGTTCCAGCGGCTCATGCAAACGCGCCGCGTCTCGACGGTCGC
CGAGCAGACCGGCATGAGCCAGCCGGGCGTCAGCAACGCGCTCGCCAAGCTGCGCCGCCGGCTCGGCGATCCGCTGTTCG
TGCGCGGCCCCGGCGGCATCGTGCCGACGCCGTTCGCCCTGCGGCTGGCGGAGCCCGTCGCGCAAGCGCTTTCGATGCTG
CACTCGGCGCTCAATCCCGAGACGCGTTTTGATCCCGCCCATGACGAGCGCGTCGTGACGATCGGCATGACCGATATCGG
CGAAGTGGTATTTCTGCCCGCCCTGCTCGAGCGCCTGGCGGCGGTCGCGCCGCGCATGGTGCTCAACACGGTGCACGACA
CCCATGCGGACCTGGGCAAGGAAATGGCCGAAGGCCGGATCGATCTGGCGATCGGGCTGCTTCCCCAGCTGCAGGCGGGC
TTCCACCAGCGCCGGCTGTTCGATCAAGCTTACGTGTGCGTGTTCCGGGCGGGGCATCCGCTCGCGAAGTCGCCGCTGAC
GATGACGAACTGGCGTGAAGCCGGGCATGTCGTGGTGGTATCGGCCGGCACCGGGCACGGACAGGTGGACGCGTGGCTGA
AGCGCCGCGGCGTGGCGCGTAACGTCCGGCTGACCGTACCTCACTTCATGAGCGTGGGACATATCCTGCAGCGCAGCGAT
CTGATCGCTACCGTGCCTGAGCGTTTGGCGATGCAACTGGCCGAGCCGTTCTCGCTGGCAATACGGCCACTTCCGGCGGC
GATGCCCCGCGCCCCGATTCATCTTTTCTGGCATACCCGCGTGCATCAGGACGACGGCAATCGATGGCTGCGCGAAGTCA
TCGCGAAGCTCTTTTCCGGGCCCGCCGCGCCGCCGCGCACGCTGCCAGCCGCCGGGAAGAACAGCAGACCCAGGCGGTGA

Upstream 100 bases:

>100_bases
CACCGTGCGGCTATTGTGTGACCAGGGTTCTCATCCCACAATAAAATACCGATAATCCACCGCATCACCGGATGAAATAA
GCGGACGGTCGACGAGGCGC

Downstream 100 bases:

>100_bases
GGCCGCGCCACGGCTCGACCGTTGCGCCGGCTCGCGCGCTCAACCCGCCGGGTCGCGCTCGCGCCTCGTCGCCACGCGCC
GCGCCGCCAGATCGGCGAGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQLDDIDLNLLVLFQRLMQTRRVSTVAEQTGMSQPGVSNALAKLRRRLGDPLFVRGPGGIVPTPFALRLAEPVAQALSML
HSALNPETRFDPAHDERVVTIGMTDIGEVVFLPALLERLAAVAPRMVLNTVHDTHADLGKEMAEGRIDLAIGLLPQLQAG
FHQRRLFDQAYVCVFRAGHPLAKSPLTMTNWREAGHVVVVSAGTGHGQVDAWLKRRGVARNVRLTVPHFMSVGHILQRSD
LIATVPERLAMQLAEPFSLAIRPLPAAMPRAPIHLFWHTRVHQDDGNRWLREVIAKLFSGPAAPPRTLPAAGKNSRPRR

Sequences:

>Translated_319_residues
MQLDDIDLNLLVLFQRLMQTRRVSTVAEQTGMSQPGVSNALAKLRRRLGDPLFVRGPGGIVPTPFALRLAEPVAQALSML
HSALNPETRFDPAHDERVVTIGMTDIGEVVFLPALLERLAAVAPRMVLNTVHDTHADLGKEMAEGRIDLAIGLLPQLQAG
FHQRRLFDQAYVCVFRAGHPLAKSPLTMTNWREAGHVVVVSAGTGHGQVDAWLKRRGVARNVRLTVPHFMSVGHILQRSD
LIATVPERLAMQLAEPFSLAIRPLPAAMPRAPIHLFWHTRVHQDDGNRWLREVIAKLFSGPAAPPRTLPAAGKNSRPRR
>Mature_319_residues
MQLDDIDLNLLVLFQRLMQTRRVSTVAEQTGMSQPGVSNALAKLRRRLGDPLFVRGPGGIVPTPFALRLAEPVAQALSML
HSALNPETRFDPAHDERVVTIGMTDIGEVVFLPALLERLAAVAPRMVLNTVHDTHADLGKEMAEGRIDLAIGLLPQLQAG
FHQRRLFDQAYVCVFRAGHPLAKSPLTMTNWREAGHVVVVSAGTGHGQVDAWLKRRGVARNVRLTVPHFMSVGHILQRSD
LIATVPERLAMQLAEPFSLAIRPLPAAMPRAPIHLFWHTRVHQDDGNRWLREVIAKLFSGPAAPPRTLPAAGKNSRPRR

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=296, Percent_Identity=28.0405405405405, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87081766, Length=269, Percent_Identity=25.2788104089219, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790147, Length=308, Percent_Identity=23.0519480519481, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35223; Mature: 35223

Theoretical pI: Translated: 11.52; Mature: 11.52

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDDIDLNLLVLFQRLMQTRRVSTVAEQTGMSQPGVSNALAKLRRRLGDPLFVRGPGGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCC
VPTPFALRLAEPVAQALSMLHSALNPETRFDPAHDERVVTIGMTDIGEVVFLPALLERLA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
AVAPRMVLNTVHDTHADLGKEMAEGRIDLAIGLLPQLQAGFHQRRLFDQAYVCVFRAGHP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LAKSPLTMTNWREAGHVVVVSAGTGHGQVDAWLKRRGVARNVRLTVPHFMSVGHILQRSD
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCC
LIATVPERLAMQLAEPFSLAIRPLPAAMPRAPIHLFWHTRVHQDDGNRWLREVIAKLFSG
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCC
PAAPPRTLPAAGKNSRPRR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLDDIDLNLLVLFQRLMQTRRVSTVAEQTGMSQPGVSNALAKLRRRLGDPLFVRGPGGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCC
VPTPFALRLAEPVAQALSMLHSALNPETRFDPAHDERVVTIGMTDIGEVVFLPALLERLA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
AVAPRMVLNTVHDTHADLGKEMAEGRIDLAIGLLPQLQAGFHQRRLFDQAYVCVFRAGHP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LAKSPLTMTNWREAGHVVVVSAGTGHGQVDAWLKRRGVARNVRLTVPHFMSVGHILQRSD
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCC
LIATVPERLAMQLAEPFSLAIRPLPAAMPRAPIHLFWHTRVHQDDGNRWLREVIAKLFSG
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCC
PAAPPRTLPAAGKNSRPRR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]