| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025030
Identifier: 238025030
GI number: 238025030
Start: 2113934
End: 2115172
Strand: Reverse
Name: 238025030
Synonym: bglu_2g16870
Alternate gene names: NA
Gene position: 2115172-2113934 (Counterclockwise)
Preceding gene: 238025031
Following gene: 238025029
Centisome position: 74.81
GC content: 67.07
Gene sequence:
>1239_bases ATGACTGCTCTGTATGCGCTCGAAGGATTGAATTTTTTCATGGCCGATGTGCAGGCGGGCATCGGGCCTTTCCTCGGCGT CTTTCTTCAGGCGAACGGCTGGCATCCGCAGATGATCGGCACCGTCATGACGCTCGGCGGCATCGCCGGCATGCTCGCGA CTTCGCCGGCGGGCGCGTTCGTCGATGCCACGCATCATAAGCGCGGCGTCATCGTCATCGCCGGATCGATGACGACGCTG GCGTCGCTCGTGCTGTGGTTCTCGCACGGTTACTGGATGGTGGCCGCCTCGCAGGTCTTCACGGCCGTGACGGGTGCCGC GCTGGGTCCGGCGGTAGCGGGCGTGACGCTCGGAATGGTTCGCGAGCAAGGCTTCGACCGGCAGTTTGGCCGCAACCAGG TGGCCAATCACGCGGGCAACGTTATCGGCGCCGCGCTCTCCGGTTGGCTCGGCTGGCGGTACGGCTTCGGCGCGGTGTTT GCGCTCGTCGGCGTGTTCGGCGTCCTGACCATCGTGTCGGCGCTGCTGATCCGCCGCGAGGCCATCGATCACGACAGCGC ACGCGGCCTGGGCGGCGCGACGGCGGGACCGCCCGGGCACGCGCAAGCGAGCGGCTTTCGCGTCCTGGCAACGTGCCGCC CGCTGCTGCTGCTCGCCGCCGCGCTCGCCATGTTTCACCTTGGCAATGCCGCGATGCTTCCGCTTTACGGCCTCGCGGTG GTCGCCGCGCATCAGGGCAATCCCAGCGCGTTGACCGCGCAGACCATCGTGGTCGCGCAACTGGTGATGGTCGTGGCCGC GTGTTTCGCGAACCGGCTGATTCAACGGATCGGCTATTGGCGCGTGATACTCGTCACCTTTCTGGCGTTGCCGCTGCGCG GACTGGTGGCCGCGATGTTCATCACCGCCTGGGGCGTATGGCCGGTACAGGTGCTCGACGGCATTGGCGCGGGCCTGCAG AGCGTGGCGGTGCCCGCCCTGGTGGTGCGGCTGCTGCAAGGAACCGGACGGGTCAACGTCGGGCAGGGCGTGGTCATGAC CGTGCAGGGCATGGGCGCCGCGCTCAGTCCTGCGCTGGGCGGCGTGCTCGCCCAGCATTTCGGTTACGCGAGCGCCTTTC TCGTGCTGGGCGCCGTGTCGATGGGATCACTCGCGCTCTGGCTGCCGTTTAGCGCATCCCTCAAAAAAGCTTGCGGCATT CGCCGCGACGTCATTGAAGATGGCCCTCTGACCACATGA
Upstream 100 bases:
>100_bases CCCGCTCGGCACCGACGCGCACGTGGTCGAACCGTGGCCGGAGCATGGCCTGCTCGGCTCGCAGCTGGGGCCCAACAAGA ACGGACGCCATTGGTGAAAC
Downstream 100 bases:
>100_bases ATCCAACTTTCCTCGCATGGGGCATTGCGCTCGCCGCGACGGCCGGCGTCATCCTGCGGCCGTTCCGCTGGCCCGAAGCG ATCTGGGCCGTGCTCGGCGC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTALYALEGLNFFMADVQAGIGPFLGVFLQANGWHPQMIGTVMTLGGIAGMLATSPAGAFVDATHHKRGVIVIAGSMTTL ASLVLWFSHGYWMVAASQVFTAVTGAALGPAVAGVTLGMVREQGFDRQFGRNQVANHAGNVIGAALSGWLGWRYGFGAVF ALVGVFGVLTIVSALLIRREAIDHDSARGLGGATAGPPGHAQASGFRVLATCRPLLLLAAALAMFHLGNAAMLPLYGLAV VAAHQGNPSALTAQTIVVAQLVMVVAACFANRLIQRIGYWRVILVTFLALPLRGLVAAMFITAWGVWPVQVLDGIGAGLQ SVAVPALVVRLLQGTGRVNVGQGVVMTVQGMGAALSPALGGVLAQHFGYASAFLVLGAVSMGSLALWLPFSASLKKACGI RRDVIEDGPLTT
Sequences:
>Translated_412_residues MTALYALEGLNFFMADVQAGIGPFLGVFLQANGWHPQMIGTVMTLGGIAGMLATSPAGAFVDATHHKRGVIVIAGSMTTL ASLVLWFSHGYWMVAASQVFTAVTGAALGPAVAGVTLGMVREQGFDRQFGRNQVANHAGNVIGAALSGWLGWRYGFGAVF ALVGVFGVLTIVSALLIRREAIDHDSARGLGGATAGPPGHAQASGFRVLATCRPLLLLAAALAMFHLGNAAMLPLYGLAV VAAHQGNPSALTAQTIVVAQLVMVVAACFANRLIQRIGYWRVILVTFLALPLRGLVAAMFITAWGVWPVQVLDGIGAGLQ SVAVPALVVRLLQGTGRVNVGQGVVMTVQGMGAALSPALGGVLAQHFGYASAFLVLGAVSMGSLALWLPFSASLKKACGI RRDVIEDGPLTT >Mature_411_residues TALYALEGLNFFMADVQAGIGPFLGVFLQANGWHPQMIGTVMTLGGIAGMLATSPAGAFVDATHHKRGVIVIAGSMTTLA SLVLWFSHGYWMVAASQVFTAVTGAALGPAVAGVTLGMVREQGFDRQFGRNQVANHAGNVIGAALSGWLGWRYGFGAVFA LVGVFGVLTIVSALLIRREAIDHDSARGLGGATAGPPGHAQASGFRVLATCRPLLLLAAALAMFHLGNAAMLPLYGLAVV AAHQGNPSALTAQTIVVAQLVMVVAACFANRLIQRIGYWRVILVTFLALPLRGLVAAMFITAWGVWPVQVLDGIGAGLQS VAVPALVVRLLQGTGRVNVGQGVVMTVQGMGAALSPALGGVLAQHFGYASAFLVLGAVSMGSLALWLPFSASLKKACGIR RDVIEDGPLTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42518; Mature: 42387
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALYALEGLNFFMADVQAGIGPFLGVFLQANGWHPQMIGTVMTLGGIAGMLATSPAGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE VDATHHKRGVIVIAGSMTTLASLVLWFSHGYWMVAASQVFTAVTGAALGPAVAGVTLGMV EECCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REQGFDRQFGRNQVANHAGNVIGAALSGWLGWRYGFGAVFALVGVFGVLTIVSALLIRRE HHCCCCHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDHDSARGLGGATAGPPGHAQASGFRVLATCRPLLLLAAALAMFHLGNAAMLPLYGLAV HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAAHQGNPSALTAQTIVVAQLVMVVAACFANRLIQRIGYWRVILVTFLALPLRGLVAAMF HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAWGVWPVQVLDGIGAGLQSVAVPALVVRLLQGTGRVNVGQGVVMTVQGMGAALSPALG HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCHHHHHHH GVLAQHFGYASAFLVLGAVSMGSLALWLPFSASLKKACGIRRDVIEDGPLTT HHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure TALYALEGLNFFMADVQAGIGPFLGVFLQANGWHPQMIGTVMTLGGIAGMLATSPAGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE VDATHHKRGVIVIAGSMTTLASLVLWFSHGYWMVAASQVFTAVTGAALGPAVAGVTLGMV EECCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REQGFDRQFGRNQVANHAGNVIGAALSGWLGWRYGFGAVFALVGVFGVLTIVSALLIRRE HHCCCCHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIDHDSARGLGGATAGPPGHAQASGFRVLATCRPLLLLAAALAMFHLGNAAMLPLYGLAV HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAAHQGNPSALTAQTIVVAQLVMVVAACFANRLIQRIGYWRVILVTFLALPLRGLVAAMF HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITAWGVWPVQVLDGIGAGLQSVAVPALVVRLLQGTGRVNVGQGVVMTVQGMGAALSPALG HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCHHHHHHH GVLAQHFGYASAFLVLGAVSMGSLALWLPFSASLKKACGIRRDVIEDGPLTT HHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]